RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 CLEC18BQ6UXF7 455 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 B3GLCTQ6Y288 498 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 Q6ZT83 130 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 C22orf34Q6ZV56 151 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 ZNF627Q7L945 461 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 ATCAYQ86WG3 371 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 CLEC18CQ8NCF0 446 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 OR8J1Q8NGP2 316 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 LILRB4Q8NHJ6 448 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 TRUB1Q8WWH5 349 aaKnown RBP8.34□□□□□ -1.07
RFX3-201ENST00000302303 ITLN2Q8WWU7 325 aaPredicted RBP8.34□□□□□ -1.07
RFX3-201ENST00000302303 HTRA1Q92743 480 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 NABP1Q96AH0 204 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 BOD1Q96IK1 185 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 ALKBH3Q96Q83 286 aaPredicted RBP8.34□□□□□ -1.07
RFX3-201ENST00000302303 VCXQ9H320 206 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 CRLF2Q9HC73 371 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 SRA1Q9HD15 236 aaKnown RBP8.34□□□□□ -1.07
RFX3-201ENST00000302303 RPRD1BQ9NQG5 326 aaKnown RBP8.34□□□□□ -1.07
RFX3-201ENST00000302303 RASSF1Q9NS23 344 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 UBAP1Q9NZ09 502 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 METRNQ9UJH8 293 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 RAB26Q9ULW5 256 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 FKBP7Q9Y680 259 aa8.34□□□□□ -1.07
RFX3-201ENST00000302303 RIIAD1A6NNX1 92 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 FAM171A2A8MVW0 826 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 XKRYO14609 159 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 DHHO43323 396 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 SLC16A7O60669 478 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 ZG16O60844 167 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 ENTPD6O75354 484 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 CNOT4O95628 575 aaKnown RBP8.34□□□□□ -1.08
RFX3-201ENST00000302303 TFP02787 698 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 ADRA2AP08913 450 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 PLA2G2AP14555 144 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 COX5AP20674 150 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 CDAP32320 146 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 PYCR1P32322 319 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 CLRN1P58418 232 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 ROR2Q01974 943 aaKnown RBP8.34□□□□□ -1.08
RFX3-201ENST00000302303 TFF3Q07654 80 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 FAPQ12884 760 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 CDK5R2Q13319 367 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 IL18R1Q13478 541 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 CEACAM16Q2WEN9 425 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 NXNL2Q5VZ03 156 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 CXXC5Q7LFL8 322 aaKnown RBP8.34□□□□□ -1.08
RFX3-201ENST00000302303 ZNF100Q8IYN0 542 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 ZNF433Q8N7K0 673 aaPredicted RBP8.34□□□□□ -1.08
RFX3-201ENST00000302303 POMGNT2Q8NAT1 580 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 ZNF555Q8NEP9 628 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 OR51L1Q8NGJ5 315 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 OR6N1Q8NGY5 312 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 CNIH3Q8TBE1 160 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 ZNF582Q96NG8 517 aaPredicted RBP8.34□□□□□ -1.08
RFX3-201ENST00000302303 FOXN4Q96NZ1 517 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 SLC38A2Q96QD8 506 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 TEAD3Q99594 435 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 NDEL1Q9GZM8 345 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 RACGAP1Q9H0H5 632 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 MRPL22Q9NWU5 206 aaKnown RBP8.34□□□□□ -1.08
RFX3-201ENST00000302303 ZNF224Q9NZL3 707 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 PROCRQ9UNN8 238 aa8.34□□□□□ -1.08
RFX3-201ENST00000302303 COA3Q9Y2R0 106 aaPredicted RBP8.34□□□□□ -1.08
RFX3-201ENST00000302303 ZNF503-AS2A6NEH8 195 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 OR6C65A6NJZ3 312 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 PRR23D1E9PI22 279 aaPredicted RBP8.33□□□□□ -1.08
RFX3-201ENST00000302303 AKAP8O43823 692 aaKnown RBP8.33□□□□□ -1.08
RFX3-201ENST00000302303 SMNDC1O75940 238 aaKnown RBP eCLIP8.33□□□□□ -1.08
RFX3-201ENST00000302303 IFNGP01579 166 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 PRR23D2P0DMB1 279 aaPredicted RBP8.33□□□□□ -1.08
RFX3-201ENST00000302303 GAAP10253 952 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 ZNF3P17036 446 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 CHRNB4P30926 498 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 HSPA13P48723 471 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 CDC42P60953 191 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 FAM27E3Q08E93 113 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 TSC22D1Q15714 1073 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 STK11Q15831 433 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 KCNMB1Q16558 191 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 FBXL19-AS1Q494R0 122 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 UGT2A3Q6UWM9 527 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 STAC2Q6ZMT1 411 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 HDDC2Q7Z4H3 204 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 MRGPRGQ86SM5 289 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 LUZP2Q86TE4 346 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 JAZF1Q86VZ6 243 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 ZNF511Q8NB15 262 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 SLC26A10Q8NG04 563 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 FGFBP3Q8TAT2 258 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 NSMAFQ92636 917 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 RBP7Q96R05 134 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 RHNO1Q9BSD3 238 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 ULBP2Q9BZM5 246 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 PIGMQ9H3S5 423 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 MARCH7Q9H992 704 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 DNAJC27Q9NZQ0 273 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 SLC5A6Q9Y289 635 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 HSPE1-MOB4S4R3N1 261 aa8.33□□□□□ -1.08
RFX3-201ENST00000302303 EIF4E1BA6NMX2 242 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms