RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 KLRG1Q96E93 195 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 MVB12BQ9H7P6 319 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 CSNK1G2P78368 415 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 OR5D13Q8NGL4 314 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 PISDQ9UG56 409 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 NRXN3Q9Y4C0 1643 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 UPK3BL1B0FP48 263 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 UPK3BL2E5RIL1 263 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 CSF2RAP15509 400 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 CD1EP15812 388 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 CGB2Q6NT52 195 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 OTOP2Q7RTS6 562 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 PARD6GQ9BYG4 376 aaPredicted RBP10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 DDOSTP39656 456 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 ZMYND19Q96E35 227 aaPredicted RBP10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 GNPNAT1Q96EK6 184 aaPredicted RBP10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 SLC6A20Q9NP91 592 aa10.38□□□□□ -0.75
HDGFL3-201ENST00000299633 GLAP06280 429 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 TMEM201Q5SNT2 666 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 LGI3Q8N145 548 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 ZNF485Q8NCK3 441 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 PTDSS2Q9BVG9 487 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 EGLN3Q9H6Z9 239 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 NECAP2Q9NVZ3 263 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 INCA1Q0VD86 236 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 ZNF691Q5VV52 312 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 ZNF626Q68DY1 528 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 LRRC56Q8IYG6 542 aaPredicted RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 KLK6Q92876 244 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 DUS3LQ96G46 650 aaKnown RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 S1PR3Q99500 378 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 GSX2Q9BZM3 304 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 AGPAT4Q9NRZ5 378 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 CFAP20Q9Y6A4 193 aaKnown RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 COL1A1P02452 1464 aaPredicted RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 RAB27BO00194 218 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 SRSF9Q13242 221 aaKnown RBP eCLIP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 ZNF738Q8NE65 137 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 GPR78Q96P69 363 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 SEC11CQ9BY50 192 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 ZNF629Q9UEG4 869 aaPredicted RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 SH2D7A6NKC9 451 aaPredicted RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 SDHDO14521 159 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 SOCS5O75159 536 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 PCGF2P35227 344 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 ARL6IP6Q8N6S5 226 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 FAM169BQ8N8A8 192 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 OR4A4PQ8NGN8 299 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 PSMG3Q9BT73 122 aaPredicted RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 SLCO1B1Q9Y6L6 691 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 MCRIP1C9JLW8 97 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 OR7C2O60412 319 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 GDF5P43026 501 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 EXOSC2Q13868 293 aaKnown RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 ARL14EPQ8N8R7 260 aaPredicted RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 AMDHD2Q9Y303 409 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 FAM171A2A8MVW0 826 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 FABP2P12104 132 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 FBLP22087 321 aaKnown RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 HHEXQ03014 270 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 RAB40BQ12829 278 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 EID2BQ96D98 161 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 RBM14Q96PK6 669 aaKnown RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 ZNF382Q96SR6 550 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 TMEM231Q9H6L2 316 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 AIFM1O95831 613 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 LTC4SQ16873 150 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 HBMQ6B0K9 141 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 SUSD1Q6UWL2 747 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 CYB5D2Q8WUJ1 264 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 SLC25A21Q9BQT8 299 aaPredicted RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 CRISP2P16562 243 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 C5AR1P21730 350 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 ASB13Q8WXK3 278 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 KCNK12Q9HB15 430 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 GALPQ9UBC7 116 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 ASGR2P07307 311 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 CCR6P51684 374 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 OR2AE1Q8NHA4 323 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 GPR22Q99680 433 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 RHOFQ9HBH0 211 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 CNOT2Q9NZN8 540 aaKnown RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 LHX6Q9UPM6 363 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 RNF24Q9Y225 148 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 HS3ST4Q9Y661 456 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 E5RGE8 158 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 RNASE1P07998 156 aaKnown RBP10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 C19orf43Q9BQ61 176 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 GNG12Q9UBI6 72 aa10.37□□□□□ -0.75
HDGFL3-201ENST00000299633 M0R3E3 92 aa10.36□□□□□ -0.75
HDGFL3-201ENST00000299633 MFSD12Q6NUT3 480 aa10.36□□□□□ -0.75
HDGFL3-201ENST00000299633 MEX3DQ86XN8 651 aaKnown RBP10.36□□□□□ -0.75
HDGFL3-201ENST00000299633 OR2G2Q8NGZ5 317 aa10.36□□□□□ -0.75
HDGFL3-201ENST00000299633 I6L893 689 aaPredicted RBP10.36□□□□□ -0.75
HDGFL3-201ENST00000299633 NME4O00746 187 aa10.36□□□□□ -0.75
HDGFL3-201ENST00000299633 ATP1B3P54709 279 aa10.36□□□□□ -0.75
HDGFL3-201ENST00000299633 SLC36A2Q495M3 483 aa10.36□□□□□ -0.75
HDGFL3-201ENST00000299633 ZNF678Q5SXM1 525 aa10.36□□□□□ -0.75
HDGFL3-201ENST00000299633 CDC20BQ86Y33 519 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms