RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 PAX7P23759 505 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 SSTP61278 116 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 RPL27P61353 136 aaKnown RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 SNTB2Q13425 540 aaKnown RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 JMJD6Q6NYC1 403 aaPredicted RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 GABRG1Q8N1C3 465 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 SIMC1Q8NDZ2 872 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 MUL1Q969V5 352 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 FOXRED1Q96CU9 486 aaPredicted RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 Q96M85 177 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 ACOT13Q9NPJ3 140 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 TREM2Q9NZC2 230 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 ZNF391Q9UJN7 358 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 TMPRSS11DO60235 418 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 GM2AP17900 193 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 TGM1P22735 817 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 ZNF404Q494X3 552 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 SSX9Q7RTT3 188 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 GDF7Q7Z4P5 450 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 MDGA2Q7Z553 956 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 PDFQ9HBH1 243 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 HINT3Q9NQE9 182 aaKnown RBP6.5□□□□□ -1.37
RAG1-201ENST00000299440 A0A087WZY1 265 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 RAB3DO95716 219 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 CT45A6P0DMU7 189 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 CT45A5P0DMU8 189 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 CT45A7P0DMV0 189 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 CT45A8P0DMV1 189 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 CT45A9P0DMV2 189 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 BDKRB2P30411 391 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 GABRA5P31644 462 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 GSG1Q2KHT4 349 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 CT45A2Q5DJT8 189 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 CT45A1Q5HYN5 189 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 AGAP6Q5VW22 663 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 PDZD9Q8IXQ8 264 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 MARVELD2Q8N4S9 558 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 ZNF321PQ8N8H1 164 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 AKR7LQ8NHP1 331 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 CT45A3Q8NHU0 189 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 MRGPRX4Q96LA9 322 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 KCNJ15Q99712 375 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 SLC26A1Q9H2B4 701 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 FN3KRPQ9HA64 309 aa6.5□□□□□ -1.37
RAG1-201ENST00000299440 TNRC6CQ9HCJ0 1690 aaKnown RBP6.49□□□□□ -1.37
RAG1-201ENST00000299440 MEX3AA1L020 520 aaKnown RBP6.49□□□□□ -1.37
RAG1-201ENST00000299440 ZNF736B4DX44 427 aaPredicted RBP6.49□□□□□ -1.37
RAG1-201ENST00000299440 HSD17B6O14756 317 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 AGTR1P30556 359 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 MAGEA5P43359 124 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 DEFA5Q01523 94 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 PDLIM3Q53GG5 364 aaPredicted RBP6.49□□□□□ -1.37
RAG1-201ENST00000299440 AKR1C8PQ5T2L2 129 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 OTPQ5XKR4 325 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 TUBA3EQ6PEY2 450 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 SYT9Q86SS6 491 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 RNF113BQ8IZP6 322 aaKnown RBP6.49□□□□□ -1.37
RAG1-201ENST00000299440 Q8N402 240 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 SLC35G3Q8N808 338 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 ZNF441Q8N8Z8 693 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 UBTD2Q8WUN7 234 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 RDH5Q92781 318 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 OXGR1Q96P68 337 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 POLDIP2Q9Y2S7 368 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 A0A1W2PPV4 95 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 FRG2CA6NGY1 282 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 PRR19A6NJB7 356 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 EDIL3O43854 480 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 GOSR1O95249 250 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 HPP00738 406 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 CD14P08571 375 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 HOXB3P14651 431 aaPredicted RBP6.49□□□□□ -1.37
RAG1-201ENST00000299440 PNLIPRP2P54317 469 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 WNT4P56705 351 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 MBOAT2Q6ZWT7 520 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 RAB1CQ92928 201 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 YTHDF1Q9BYJ9 559 aaKnown RBP6.49□□□□□ -1.37
RAG1-201ENST00000299440 EIF5A2Q9GZV4 153 aaKnown RBP6.49□□□□□ -1.37
RAG1-201ENST00000299440 RIMS4Q9H426 269 aaPredicted RBP6.49□□□□□ -1.37
RAG1-201ENST00000299440 PLK3Q9H4B4 646 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 ACOD1A6NK06 481 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 SH2D1BO14796 132 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 OLFM2O95897 454 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 C7P10643 843 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 FPR3P25089 353 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 GABRB3P28472 473 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 RPL23AP62750 156 aaKnown RBP6.49□□□□□ -1.37
RAG1-201ENST00000299440 RAB1AP62820 205 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 SLC14A1Q13336 389 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 FGFBP1Q14512 234 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 NKG7Q16617 165 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 ST3GAL2Q16842 350 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 COQ5Q5HYK3 327 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 Q6ZPB1 254 aaPredicted RBP6.49□□□□□ -1.37
RAG1-201ENST00000299440 ABHD11Q8NFV4 315 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 OR2A1Q8NGT9 310 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 OR2T11Q8NH01 316 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 TCTEX1D2Q8WW35 142 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 UPRTQ96BW1 309 aa6.49□□□□□ -1.37
RAG1-201ENST00000299440 LYSMD1Q96S90 227 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms