RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 DMKNQ6E0U4 476 aaPredicted RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 SLITRK4Q8IW52 837 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 ACOT12Q8WYK0 555 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 PGLYRP3Q96LB9 341 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 INPP5EQ9NRR6 644 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 FRRS1LQ9P0K9 344 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 DHDHQ9UQ10 334 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 TMEM269A0A1B0GVZ9 245 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 C9J4A7 227 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 P2RY10O00398 339 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 ZNHIT1O43257 154 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 AKR7A2O43488 359 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 CD2P06729 351 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 ZNF28P17035 718 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 CD53P19397 219 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 GDNFP39905 211 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 GLO1Q04760 184 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 FCN2Q15485 313 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 SLC18B1Q6NT16 456 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 TMEM53Q6P2H8 277 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 OGFOD3Q6PK18 319 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 KLHL24Q6TFL4 600 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 SLC16A9Q7RTY1 509 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 LRRC18Q8N456 261 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 OR52I2Q8NH67 350 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 FAM71F1Q96KD3 344 aaPredicted RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 GPER1Q99527 375 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 WDR77Q9BQA1 342 aaPredicted RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 UCK1Q9HA47 277 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 KLHL9Q9P2J3 617 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 CKLFQ9UBR5 152 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 ICAM5Q9UMF0 924 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 EXPH5Q8NEV8 1989 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 IGHV5-10-1A0A0J9YXX1 117 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 ZFAND5O76080 213 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 CD1AP06126 327 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 UCHL1P09936 223 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 ARSBP15848 533 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 EPHA8P29322 1005 aaPredicted RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 RIDAP52758 137 aaKnown RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 CLRN1P58418 232 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 UBE2MP61081 183 aaKnown RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 RPL27P61353 136 aaKnown RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 PUDPQ08623 228 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 C17orf67Q0P5P2 114 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 SF3A2Q15428 464 aaKnown RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 SCGB2B2Q4G0G5 96 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 PYHIN1Q6K0P9 492 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 GRINAQ7Z429 371 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 MEIOBQ8N635 442 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 SCAIQ8N9R8 606 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 OR8H1Q8NGG4 311 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 OR2G2Q8NGZ5 317 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 GPR148Q8TDV2 347 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 SLC7A6Q92536 515 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 SLC25A44Q96H78 314 aaPredicted RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 PPP1R3EQ9H7J1 279 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 SERINC1Q9NRX5 453 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 TAS2R5Q9NYW4 299 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 VSX1Q9NZR4 365 aaPredicted RBP8.39□□□□□ -1.07
PRDM9-201ENST00000296682 PISDQ9UG56 409 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 NOX1Q9Y5S8 564 aa8.39□□□□□ -1.07
PRDM9-201ENST00000296682 ICE1Q9Y2F5 2266 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 TRAV8-7A0A075B6U6 113 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 PDCD5O14737 125 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ARPC3O15145 178 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 GATBO75879 557 aaKnown RBP8.38□□□□□ -1.07
PRDM9-201ENST00000296682 IGKV3-11P04433 115 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 SSTR2P30874 369 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 AP2S1P53680 142 aaPredicted RBP8.38□□□□□ -1.07
PRDM9-201ENST00000296682 DCAF7P61962 342 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ASAH1Q13510 395 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 NKPD1Q17RQ9 610 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 KCTD18Q6PI47 426 aaPredicted RBP8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ANKRD37Q7Z713 158 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 OR13C3Q8NGS6 347 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 OR6F1Q8NGZ6 308 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 GRPEL2Q8TAA5 225 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 TRAF4Q9BUZ4 470 aaPredicted RBP8.38□□□□□ -1.07
PRDM9-201ENST00000296682 DUSP23Q9BVJ7 150 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ZCCHC4Q9H5U6 513 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ST6GALNAC2Q9UJ37 374 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 HIF3AQ9Y2N7 669 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 PRSS37A4D1T9 235 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ALG1L2C9J202 215 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 F5H5K5 113 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 PIN1P1O15428 100 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 SC5DO75845 299 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 WDPCPO95876 746 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 IGHV3-9P01782 118 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 HSD11B1P28845 292 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 GALNSP34059 522 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 ART1P52961 327 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 PNLIPRP2P54317 469 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 GUCA2AQ02747 115 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 SRYQ05066 204 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 Q499Y3 187 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 STAC2Q6ZMT1 411 aa8.38□□□□□ -1.07
PRDM9-201ENST00000296682 CPEB2Q7Z5Q1 589 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms