RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 PTGER4P35408 488 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 DIO1P49895 249 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 SELENOVP59797 346 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 YIPF6Q96EC8 236 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 MEGF6O75095 1541 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 FANCMQ8IYD8 2048 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 OR5K4A6NMS3 321 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 K7ERU9 68 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 SRYQ05066 204 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 TUSC1Q2TAM9 212 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 C10orf71Q711Q0 1435 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 SLC16A6O15403 523 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 ENTPD8Q5MY95 495 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF684Q5T5D7 378 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 STUMQ69YW2 141 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 SOX7Q9BT81 388 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 C20orf27Q9GZN8 174 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 AMTP48728 403 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 C22orf39Q6P5X5 142 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 LIPIQ6XZB0 460 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 SLC16A12Q6ZSM3 486 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 OR5A2Q8NGI9 324 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 TMEM106AQ96A25 262 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF337Q9Y3M9 751 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 SUSD5O60279 629 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 GALTP07902 379 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 ZDHHC4Q9NPG8 344 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 C9J4A7 227 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 FTCDNL1E5RQL4 147 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 OR8U8P0C7N1 319 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 ALOX5APP20292 161 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 IRS1P35568 1242 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 HBA1P69905 142 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 IKZF1Q13422 519 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 STT3BQ8TCJ2 826 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 LHX4Q969G2 390 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 DMRT3Q9NQL9 472 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 XRN1Q8IZH2 1706 aaKnown RBP10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 H3BML4 177 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 ACOT6Q3I5F7 207 aaPredicted RBP10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 PAQR6Q6TCH4 344 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 TMEM135Q86UB9 458 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 BOCQ9BWV1 1114 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 LPAR5Q9H1C0 372 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 PAPLNO95428 1278 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 SCNN1AP37088 669 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 GABRQQ9UN88 632 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 A0A087WUU8 490 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 SMIM35A0A1B0GVV1 85 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 PPP6CO00743 305 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 GLI4P10075 376 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 C19orf43Q9BQ61 176 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 ZDHHC5Q9C0B5 715 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 GSX1Q9H4S2 264 aaPredicted RBP10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 CHST2Q9Y4C5 530 aa10.88□□□□□ -0.67
SHROOM3-201ENST00000296043 FGF19O95750 216 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 HRH2P25021 359 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 DUSP1P28562 367 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 MTCP1P56278 107 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 PHF19Q5T6S3 580 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 LGI3Q8N145 548 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 DPH7Q9BTV6 452 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 ANTXRLA6NF34 631 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 MAJINQ3KP22 176 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 TCTEX1D1Q8N7M0 179 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 BCO2Q9BYV7 579 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 KDM4EB2RXH2 506 aaPredicted RBP10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 OR8G1Q15617 311 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 HENMT1Q5T8I9 393 aaKnown RBP10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 CBLL1Q75N03 491 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 S100A7AQ86SG5 101 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 SYT9Q86SS6 491 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 THNSL2Q86YJ6 484 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 NPWQ8N729 165 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 OR9A4Q8NGU2 314 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 METTL9Q9H1A3 318 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 AUNIPQ9H7T9 357 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF835Q9Y2P0 537 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 ELOA3CA0A087WX78 387 aaPredicted RBP10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 SOX15O60248 233 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 CLMPQ9H6B4 373 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 C5orf52A6NGY3 159 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 FZD9O00144 591 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 RPL12P30050 165 aaKnown RBP10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 RFC3P40938 356 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 UBE2G1P62253 170 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 NHLH1Q02575 133 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 NHLH2Q02577 135 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 VEZF1Q14119 521 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 TPRG1Q6ZUI0 275 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF687Q8N1G0 1237 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 CGGBP1Q9UFW8 167 aaPredicted RBP10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 MYO16Q9Y6X6 1858 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 NID2Q14112 1375 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 CASP6P55212 293 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 LCTLQ6UWM7 567 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 RNF175Q8N4F7 328 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 LRRC15Q8TF66 581 aa10.87□□□□□ -0.67
SHROOM3-201ENST00000296043 KCTD13Q8WZ19 329 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms