RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 TMEM218A2RU14 115 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 OR6C74A6NCV1 312 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 C2orf74A8MZ97 194 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 H0YC42 278 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 UPK3AO75631 287 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 RBBP9O75884 186 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 ZFPL1O95159 310 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 ACHEP22303 614 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 HCCSP53701 268 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 NANOS3P60323 173 aaKnown RBP9.42□□□□□ -0.9
SKA1-201ENST00000285116 FDX2Q6P4F2 183 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 FAM122BQ7Z309 247 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 ZNF546Q86UE3 836 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 GLB1L2Q8IW92 636 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 SPAG16Q8N0X2 631 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 OR6N1Q8NGY5 312 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 OR14C36Q8NHC7 312 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 A0A0J9YY10 115 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 KANTRA0A1W2PQU2 76 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 GPR31O00270 319 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 XRCC3O43542 346 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 PTHLHP12272 177 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 NAA10P41227 235 aaPredicted RBP9.42□□□□□ -0.9
SKA1-201ENST00000285116 UBE2MP61081 183 aaKnown RBP9.42□□□□□ -0.9
SKA1-201ENST00000285116 ID2Q02363 134 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 ALKBH1Q13686 389 aaKnown RBP9.42□□□□□ -0.9
SKA1-201ENST00000285116 DHRS7BQ6IAN0 325 aaPredicted RBP9.42□□□□□ -0.9
SKA1-201ENST00000285116 TMEM88Q6PEY1 159 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 KCNRGQ8N5I3 272 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 C12orf45Q8N5I9 185 aaPredicted RBP9.42□□□□□ -0.9
SKA1-201ENST00000285116 ADAMTS18Q8TE60 1221 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 ZNRF4Q8WWF5 429 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 TTTY10Q9BZA0 68 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 LMAN2LQ9H0V9 348 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 RXFP3Q9NSD7 469 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 NOSIPQ9Y314 301 aaKnown RBP9.42□□□□□ -0.9
SKA1-201ENST00000285116 TRAV14DV4A0A0A6YYC5 116 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 TMEM272A0A1B0GTI8 110 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 H7C417 338 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 CSF1P09603 554 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 AK4P27144 223 aaPredicted RBP9.42□□□□□ -0.9
SKA1-201ENST00000285116 GALNSP34059 522 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 CLDN12P56749 244 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 CDC20BQ86Y33 519 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 FAM3CQ92520 227 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 FGF14Q92915 247 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 PDCD10Q9BUL8 212 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 PLA2G2FQ9BZM2 168 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 ALX4Q9H161 411 aaPredicted RBP9.42□□□□□ -0.9
SKA1-201ENST00000285116 SLC25A18Q9H1K4 315 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 MTFP1Q9UDX5 166 aa9.42□□□□□ -0.9
SKA1-201ENST00000285116 GPN3Q9UHW5 284 aaPredicted RBP9.42□□□□□ -0.9
SKA1-201ENST00000285116 C10orf142B7Z368 130 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 K7EQS6 105 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 MAGEB4O15481 346 aaPredicted RBP9.41□□□□□ -0.9
SKA1-201ENST00000285116 CD37P11049 281 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 PNMTP11086 282 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 UBE2IP63279 158 aaKnown RBP9.41□□□□□ -0.9
SKA1-201ENST00000285116 EGR3Q06889 387 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 SERTAD2Q14140 314 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 ZNF345Q14585 488 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 SWI5Q1ZZU3 235 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 PCGF3Q3KNV8 242 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 PRSS41Q7RTY9 318 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 OR4C16Q8NGL9 310 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 ZNF417Q8TAU3 575 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 GLYATL2Q8WU03 294 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 SFT2D1Q8WV19 159 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 C3orf49Q96BT1 292 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 NMNAT3Q96T66 252 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 ALG12Q9BV10 488 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 MYOZ1Q9NP98 299 aaPredicted RBP9.41□□□□□ -0.9
SKA1-201ENST00000285116 MBD2Q9UBB5 411 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 MSRAQ9UJ68 235 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 CNTRLQ7Z7A1 2325 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 COL5A1P20908 1838 aaPredicted RBP9.41□□□□□ -0.9
SKA1-201ENST00000285116 IGKV1D-42A0A075B6H8 117 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 SERINC4A6NH21 518 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 ACOD1A6NK06 481 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 PRR32B1ATL7 298 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 PHYHO14832 338 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 OR2F2O95006 317 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 PPIAP62937 165 aaKnown RBP9.41□□□□□ -0.9
SKA1-201ENST00000285116 DCDP81605 110 aaKnown RBP9.41□□□□□ -0.9
SKA1-201ENST00000285116 OR2F1Q13607 317 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 GPR18Q14330 331 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 ITPRIPL2Q3MIP1 535 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 C4orf46Q504U0 113 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 PAN3Q58A45 887 aaKnown RBP9.41□□□□□ -0.9
SKA1-201ENST00000285116 FNDC7Q5VTL7 733 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 PARM1Q6UWI2 310 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 DGAT2L6Q6ZPD8 337 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 OR2W3Q7Z3T1 314 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 FAM220AQ7Z4H9 259 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.41□□□□□ -0.9
SKA1-201ENST00000285116 CSNK1A1LQ8N752 337 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 CCDC74AQ96AQ1 378 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 TMEM185BQ9H7F4 350 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 APMAPQ9HDC9 416 aa9.41□□□□□ -0.9
SKA1-201ENST00000285116 DZANK1Q9NVP4 752 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms