RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 MBOAT1Q6ZNC8 495 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 Q6ZSR3 168 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 LANCL3Q6ZV70 420 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 SETD3Q86TU7 594 aaPredicted RBP3.97□□□□□ -1.77
CD44-202ENST00000278385 TAC4Q86UU9 113 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 TMEM139Q8IV31 216 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 GID4Q8IVV7 300 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 RCOR2Q8IZ40 523 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 SPAG16Q8N0X2 631 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 CENPSQ8N2Z9 138 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 TRAM1L1Q8N609 369 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 NANOGP1Q8N7R0 232 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 LRTM2Q8N967 370 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 OR10A7Q8NGE5 316 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 OR5B17Q8NGF7 314 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 OR13C5Q8NGS8 318 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 OR6N2Q8NGY6 317 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 PLPPR1Q8TBJ4 325 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 SLC35F5Q8WV83 523 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 MRPS31Q92665 395 aaKnown RBP3.97□□□□□ -1.77
CD44-202ENST00000278385 ISOC2Q96AB3 205 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 OR5B2Q96R09 309 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 CNN2Q99439 309 aaKnown RBP3.97□□□□□ -1.77
CD44-202ENST00000278385 PKMYT1Q99640 499 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 MAPKAP1Q9BPZ7 522 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 ECSITQ9BQ95 431 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 DCUN1D5Q9BTE7 237 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 OR51M1Q9H341 326 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 IKZF5Q9H5V7 419 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 POPDC2Q9HBU9 364 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 VCX3AQ9NNX9 186 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 HEBP1Q9NRV9 189 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 MAT2BQ9NZL9 334 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 KLRF1Q9NZS2 232 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 ZNF221Q9UK13 617 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 CLEC4EQ9ULY5 219 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 MYO6Q9UM54 1294 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 AP3M1Q9Y2T2 418 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 WDR81Q562E7 1941 aa3.97□□□□□ -1.77
CD44-202ENST00000278385 PRUNE2Q8WUY3 3088 aa3.96□□□□□ -1.77
CD44-202ENST00000278385 ARID2Q68CP9 1835 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 TRAV19A0A0A6YYK7 116 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 A0A1W2PRF3 423 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 A0A1W2PRM7 423 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 SLC22A23A1A5C7 686 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 SAGE2PA6NJ88 616 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 C15orf62A8K5M9 175 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 CCSO14618 274 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 CASKO14936 926 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 CFLARO15519 480 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 EFNA2O43921 213 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 ZIC3O60481 467 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 TOXO94900 526 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 PLAUP00749 431 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 FGGP02679 453 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 H1F0P07305 194 aaKnown RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 GSTA1P08263 222 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 KRT16P08779 473 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 PET100P0DJ07 73 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 CHRNB1P11230 501 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 ATF6P18850 670 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 LMO2P25791 158 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 GPR1P46091 355 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 PGFP49763 221 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 HLCSP50747 726 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 XKP51811 444 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 NDUFA8P51970 172 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 KPNA2P52292 529 aaKnown RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 PKNOX1P55347 436 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 ERVS71-1P61550 626 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 OPCMLQ14982 345 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 PDGFRLQ15198 375 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 KCTD19Q17RG1 926 aaPredicted RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 SLC25A52Q3SY17 297 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 SLC36A2Q495M3 483 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 C1orf220Q5T0J3 134 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 ABHD13Q7L211 337 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 RALGPS2Q86X27 583 aaPredicted RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 METTL4Q8N3J2 472 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 OR56A4Q8NGH8 313 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 OR4Q3Q8NH05 313 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 OR2L2Q8NH16 312 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 TFGQ92734 400 aaPredicted RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 CDS1Q92903 461 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 PCED1BQ96HM7 432 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 TXNDC15Q96J42 360 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 PACRGQ96M98 296 aaPredicted RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 RNF145Q96MT1 663 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 MCCC1Q96RQ3 725 aaPredicted RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 SYT15Q9BQS2 421 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 MRPL45Q9BRJ2 306 aaKnown RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 DCTN5Q9BTE1 182 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 PAPOLGQ9BWT3 736 aaKnown RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 UCK2Q9BZX2 261 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 NXF5Q9H1B4 397 aaKnown RBP3.96□□□□□ -1.78
CD44-202ENST00000278385 CXXC4Q9H2H0 198 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 KLHL31Q9H511 634 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 AAMDCQ9H7C9 122 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 NIPAL2Q9H841 368 aa3.96□□□□□ -1.78
CD44-202ENST00000278385 MOV10Q9HCE1 1003 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms