RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 ZNF750Q32MQ0 723 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 ZNF684Q5T5D7 378 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 C18orf63Q68DL7 685 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 ZNF574Q6ZN55 896 aaPredicted RBP9.37□□□□□ -0.91
UPF3B-201ENST00000276201 FCRLAQ7L513 359 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 IZUMO1Q8IYV9 350 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 SLC16A11Q8NCK7 471 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 SYNPRQ8TBG9 265 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 DMRTA2Q96SC8 542 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 NMNAT2Q9BZQ4 307 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 SEMA6CQ9H3T2 930 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 IFT22Q9H7X7 185 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 MCCC2Q9HCC0 563 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 DUSP22Q9NRW4 184 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 HPF1Q9NWY4 346 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 KLK11Q9UBX7 282 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 EPHA6Q9UF33 1036 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 FBXL2Q9UKC9 423 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 A0A087WV62 115 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 A0A0B4J2E0 115 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 A0A0G2JN53 185 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 TRBV5-5A0A0J9YX44 114 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 A0A1B0GX12 115 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 RAB19A4D1S5 217 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 ACOD1A6NK06 481 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 GLOD5A6NK44 160 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 TTLL8A6PVC2 850 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 HSPB2A8KAH6 182 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 H3BUI4 141 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 PYCARD-AS1I3L0S3 204 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 LGALS8O00214 317 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 ARPC5O15511 151 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 SLC25A4P12235 298 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 CCKBRP32239 447 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 H2BFSP57053 126 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 RTP5Q14D33 572 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 HSPB2Q16082 182 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 MICBQ29980 383 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 FHL5Q5TD97 284 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 LPCAT3Q6P1A2 487 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 LINC00114Q6XXX2 140 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 LURAP1LQ8IV03 231 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 DND1Q8IYX4 353 aaKnown RBP9.37□□□□□ -0.91
UPF3B-201ENST00000276201 LRRC25Q8N386 305 aaPredicted RBP9.37□□□□□ -0.91
UPF3B-201ENST00000276201 OR7G2Q8NG99 324 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 OR10G6Q8NH81 332 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 NT5CQ8TCD5 201 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 THRSPQ92748 146 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 GAL3ST3Q96A11 431 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.37□□□□□ -0.91
UPF3B-201ENST00000276201 NRSN2Q9GZP1 204 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 SLITRK2Q9H156 845 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 SLC17A5Q9NRA2 495 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 MRPL15Q9P015 296 aaKnown RBP9.37□□□□□ -0.91
UPF3B-201ENST00000276201 ZNF107Q9UII5 783 aaPredicted RBP9.37□□□□□ -0.91
UPF3B-201ENST00000276201 C19orf53Q9UNZ5 99 aaPredicted RBP9.37□□□□□ -0.91
UPF3B-201ENST00000276201 PLCL2Q9UPR0 1127 aa9.37□□□□□ -0.91
UPF3B-201ENST00000276201 NUDT19A8MXV4 375 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 DUX1O43812 170 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 PPP1R3DO95685 299 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 CDK2P24941 298 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 DCTDP32321 178 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 MAP3K8P41279 467 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 ZMYND11Q15326 602 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 DUSP5Q16690 384 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 NDUFAF6Q330K2 333 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 HES5Q5TA89 166 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 OR7E24Q6IFN5 339 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 ZNF425Q6IV72 752 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 LIN54Q6MZP7 749 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 FAM111BQ6SJ93 734 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 NHLRC1Q6VVB1 395 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 KCNRGQ8N5I3 272 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 SNX33Q8WV41 574 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 HOXB13Q92826 284 aaPredicted RBP9.36□□□□□ -0.91
UPF3B-201ENST00000276201 LIN37Q96GY3 246 aaPredicted RBP9.36□□□□□ -0.91
UPF3B-201ENST00000276201 OR1F2PQ96R84 312 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 NKX6-2Q9C056 277 aaPredicted RBP9.36□□□□□ -0.91
UPF3B-201ENST00000276201 PIGMQ9H3S5 423 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 TMEM27Q9HBJ8 222 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 MRPS30Q9NP92 439 aaKnown RBP9.36□□□□□ -0.91
UPF3B-201ENST00000276201 EQTNQ9NQ60 294 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 MEPEQ9NQ76 525 aaPredicted RBP9.36□□□□□ -0.91
UPF3B-201ENST00000276201 APC2O95996 2303 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 IGHV5-10-1A0A0J9YXX1 117 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 TCRBV16S1A1N1A0A5B0 115 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 GXYLT2A0PJZ3 443 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 ZNF98A6NK75 572 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 SULT1C2O00338 296 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 ARPC3O15145 178 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 RBBP9O75884 186 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 OR2F2O95006 317 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 PMS2P2O95744 297 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 ZNF35P13682 527 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 CERS1P27544 350 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 TNFRSF17Q02223 184 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 STX4Q12846 297 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 OR2F1Q13607 317 aa9.36□□□□□ -0.91
UPF3B-201ENST00000276201 MRPL2Q5T653 305 aaKnown RBP9.36□□□□□ -0.91
UPF3B-201ENST00000276201 PHF19Q5T6S3 580 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms