RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 CACNA1CQ13936 2221 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 COL6A3P12111 3177 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 NPIPB15A6NHN6 443 aaPredicted RBP7.98□□□□□ -1.13
VAPB-201ENST00000265619 OR2AG2A6NM03 316 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 ZNF749O43361 778 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 OR1F1O43749 312 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 SNAPC5O75971 98 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 SLC16A8O95907 504 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 CD5P06127 495 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 RB1P06400 928 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 NPSP0C0P6 89 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 LINC00271P0C7V0 271 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 GSTM3P21266 225 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 NTSP30990 170 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 APLNRP35414 380 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 GNG10P50151 68 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 DHRS2Q13268 280 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 C22orf39Q6P5X5 142 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 CARFQ8N187 725 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 DCAF4L2Q8NA75 395 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 ST7LQ8TDW4 575 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 FGF13Q92913 245 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 TCTN2Q96GX1 697 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 ZPBPQ9BS86 351 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 LMAN2LQ9H0V9 348 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 NCOR1P1Q9H4R4 102 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 OR2S2Q9NQN1 319 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 LANCL2Q9NS86 450 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 CLDND1Q9NY35 253 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 STOX2Q9P2F5 926 aaPredicted RBP7.98□□□□□ -1.13
VAPB-201ENST00000265619 TRPC4Q9UBN4 977 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 MSRAQ9UJ68 235 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 HEATR5BQ9P2D3 2071 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 EML5Q05BV3 1969 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 SPEGQ15772 3267 aa7.98□□□□□ -1.13
VAPB-201ENST00000265619 TRAPPC13A5PLN9 417 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 ACOT7O00154 380 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 MAN2B1O00754 1011 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 CD14P08571 375 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 OR8U9P0C7N5 309 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 PDHA2P29803 388 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 RAB5CP51148 216 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 MANFP55145 182 aaKnown RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 SMIM11AP58511 58 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 SNRPD1P62314 119 aaKnown RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 FOXK1P85037 733 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 SLBPQ14493 270 aaKnown RBP eCLIP7.97□□□□□ -1.13
VAPB-201ENST00000265619 SSPNQ14714 243 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 ZNF311Q5JNZ3 666 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 AGTRAPQ6RW13 159 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 GALNT16Q8N428 558 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 OR2AP1Q8NGE2 309 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 OR8U1Q8NH10 309 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 RNASE11Q8TAA1 199 aaKnown RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 ZNRF4Q8WWF5 429 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 SMPDL3AQ92484 453 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 THOC3Q96J01 351 aaKnown RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 HSPA12BQ96MM6 686 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 MYADMQ96S97 322 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 SULT4A1Q9BR01 284 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 DPH1Q9BZG8 443 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 RAB33BQ9H082 229 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 NRIP3Q9NQ35 241 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 C20orf141Q9NUB4 165 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 GAR1Q9NY12 217 aaKnown RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 TP53TG5Q9Y2B4 290 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 SLC35A3Q9Y2D2 325 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 MMP24Q9Y5R2 645 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 A0A1W2PS29 197 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 OTOL1A6NHN0 477 aaPredicted RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 EEF1E1-BLOC1S5C9J1V9 151 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 LEFTY1O75610 366 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 GLCEO94923 617 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 SERPINA5P05154 406 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 SBK2P0C263 348 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 NR2F1P10589 423 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 AGTR1P30556 359 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 PRKAG1P54619 331 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 CARD18P57730 90 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 AP1S1P61966 158 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 C2orf27AQ580R0 203 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 PRPF38BQ5VTL8 546 aaKnown RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 GKN2Q86XP6 184 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 PRSS35Q8N3Z0 413 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 DIO2Q92813 273 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 RSPRY1Q96DX4 576 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 S100A16Q96FQ6 103 aaKnown RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 TAAR9Q96RI9 348 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 KCNG2Q9UJ96 466 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 AMDHD2Q9Y303 409 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 H0YIZ8 118 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 BLOC1S5-TXNDC5H3BN57 136 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 H7C417 338 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 M0R036 132 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 KLF4O43474 513 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 ZNF821O75541 412 aaPredicted RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 ITGA10O75578 1167 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 GLSO94925 669 aaPredicted RBP7.97□□□□□ -1.13
VAPB-201ENST00000265619 CSN2P05814 226 aa7.97□□□□□ -1.13
VAPB-201ENST00000265619 FCGR3AP08637 254 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms