RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 A6NIZ1 184 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 ZNF780AO75290 641 aaPredicted RBP10.02□□□□□ -0.81
MSH3-201ENST00000265081 CD3GP09693 182 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 CTLA4P16410 223 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 RAP1BP61224 184 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 RAP1AP62834 184 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 SSBP1Q04837 148 aaKnown RBP10.02□□□□□ -0.81
MSH3-201ENST00000265081 TMEM255AQ5JRV8 349 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 PTCRAQ6ISU1 281 aaPredicted RBP10.02□□□□□ -0.81
MSH3-201ENST00000265081 DEGS2Q6QHC5 323 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 ESPNLQ6ZVH7 1005 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 SLC26A10Q8NG04 563 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 SPSB2Q99619 263 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 SLC25A18Q9H1K4 315 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 SRA1Q9HD15 236 aaKnown RBP10.02□□□□□ -0.81
MSH3-201ENST00000265081 NPDC1Q9NQX5 325 aaPredicted RBP10.02□□□□□ -0.81
MSH3-201ENST00000265081 ZNF593O00488 134 aaPredicted RBP10.02□□□□□ -0.81
MSH3-201ENST00000265081 XRCC3O43542 346 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 MELTFP08582 738 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 MSX1P28360 303 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 DCTDP32321 178 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 MAGEB1P43366 347 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 ARL4DP49703 201 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 DHODHQ02127 395 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 NR0B2Q15466 257 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 ANKRD16Q6P6B7 361 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 ZNF782Q6ZMW2 699 aaPredicted RBP10.02□□□□□ -0.81
MSH3-201ENST00000265081 ASB18Q6ZVZ8 466 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 CREB3L2Q70SY1 520 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 WDR5BQ86VZ2 330 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 TMEM234Q8WY98 164 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 G6PC2Q9NQR9 355 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 KLHL9Q9P2J3 617 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 PILRBQ9UKJ0 227 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 KIAA1549Q9HCM3 1950 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 A0A1B0GVC2 190 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 A6NIN4 97 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 ALOX12BO75342 701 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 FBXO45P0C2W1 286 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 CXCL12P48061 93 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 INPP1P49441 399 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 HES5Q5TA89 166 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 C1orf189Q5VU69 101 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 ARMC10Q8N2F6 343 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 FADS6Q8N9I5 356 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 OR51A4Q8NGJ6 313 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 ORAI1Q96D31 301 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 NPAS1Q99742 590 aa10.02□□□□□ -0.81
MSH3-201ENST00000265081 MRPL13Q9BYD1 178 aaKnown RBP10.02□□□□□ -0.81
MSH3-201ENST00000265081 TVP23AA6NH52 213 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 PRAF2O60831 178 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 GPANK1O95872 356 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 PNPP00491 289 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 CRABP1P29762 137 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 PMS2CLQ68D20 193 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 SLC18B1Q6NT16 456 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 ZNF529Q6P280 563 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 FCRLAQ7L513 359 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 BPHLQ86WA6 291 aaPredicted RBP10.01□□□□□ -0.81
MSH3-201ENST00000265081 OR6N2Q8NGY6 317 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 OR10AC1Q8NH08 325 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 SYNPRQ8TBG9 265 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 POC1BQ8TC44 478 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 HYLS1Q96M11 299 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 TMEM246Q9BRR3 403 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 COMMD4Q9H0A8 199 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 C20orf85Q9H1P6 137 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 WDR54Q9H977 334 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 NUDT15Q9NV35 164 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 B3GAT1Q9P2W7 334 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 A0A1B0GUH1 482 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 DHFRP00374 187 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 FGF5P12034 268 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 CPN1P15169 458 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 SLC7A5P1Q8MH63 180 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 C10orf53Q8N6V4 93 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 CLIP3Q96DZ5 547 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 ZNF587Q96SQ5 575 aaPredicted RBP10.01□□□□□ -0.81
MSH3-201ENST00000265081 AUP1Q9Y679 476 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 WDFY3Q8IZQ1 3526 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 LOC102725191A0A1B0GVB3 256 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 LIPT2A6NK58 231 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 PSMD9O00233 223 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 EFNA2O43921 213 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 SERPINI2O75830 405 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 WNT11O96014 354 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 IL11P20809 199 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 CDK2P24941 298 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 GIFP27352 417 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 ZP1P60852 638 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 HIST3H3Q16695 136 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 PLPPR5Q32ZL2 321 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 NKAIN1Q4KMZ8 207 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 BCL2L15Q5TBC7 163 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 OR52N5Q8NH56 324 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 OR52I2Q8NH67 350 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 METTL21AQ8WXB1 218 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 ATOH1Q92858 354 aaPredicted RBP10.01□□□□□ -0.81
MSH3-201ENST00000265081 PTX4Q96A99 478 aa10.01□□□□□ -0.81
MSH3-201ENST00000265081 TEKT2Q9UIF3 430 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms