RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 AGERQ15109 404 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 STEAP1BQ6NZ63 245 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 ABHD17CQ6PCB6 329 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 FAM111BQ6SJ93 734 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 THSD4Q6ZMP0 1018 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 ACOT4Q8N9L9 421 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 OR4K14Q8NGD5 310 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 OR1J2Q8NGS2 313 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 NUBPLQ8TB37 319 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 MS4A6EQ96DS6 147 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 RAB3CQ96E17 227 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 PRDM7Q9NQW5 492 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 PPP4R1LQ9P1A2 415 aa11.94□□□□□ -0.5
NUP54-201ENST00000264883 ZNF223Q9UK11 482 aaPredicted RBP11.94□□□□□ -0.5
NUP54-201ENST00000264883 ERI3O43414 337 aaKnown RBP11.93□□□□□ -0.5
NUP54-201ENST00000264883 RAB5AP20339 215 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 MC3RP41968 323 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 RBP2P50120 134 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 SPCS3P61009 180 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 PLA2G7Q13093 441 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 DUSP8Q13202 625 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 TGIF1Q15583 401 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 PRAMEF17Q5VTA0 474 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 FRRS1Q6ZNA5 592 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 GRASPQ7Z6J2 395 aaPredicted RBP11.93□□□□□ -0.5
NUP54-201ENST00000264883 RNASE11Q8TAA1 199 aaKnown RBP11.93□□□□□ -0.5
NUP54-201ENST00000264883 NUDCD2Q8WVJ2 157 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 ARRDC3Q96B67 414 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 TMEM68Q96MH6 324 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 NECAB3Q96P71 396 aaPredicted RBP11.93□□□□□ -0.5
NUP54-201ENST00000264883 FBXL21Q9UKT6 434 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 ATG4BQ9Y4P1 393 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 A0A0A6YYC8 382 aaPredicted RBP11.93□□□□□ -0.5
NUP54-201ENST00000264883 A0A0G2JN53 185 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 EDDM13A0A1B0GTR0 161 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 A0A1B0GWJ7 208 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 IDSB3KWA1 339 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 I3L1I5 382 aaPredicted RBP11.93□□□□□ -0.5
NUP54-201ENST00000264883 KCNAB3O43448 404 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 FAM157CP0CG43 387 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 ACKR3P25106 362 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 RBM34P42696 430 aaKnown RBP11.93□□□□□ -0.5
NUP54-201ENST00000264883 GLP1RP43220 463 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 DHRS2Q13268 280 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 IRF4Q15306 451 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 ARHGAP11BQ3KRB8 267 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 PYY3Q5JQD4 70 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 TMPRSS11FQ6ZWK6 438 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 NRROSQ86YC3 692 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 OR4C6Q8NH72 309 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 ZMYND19Q96E35 227 aaPredicted RBP11.93□□□□□ -0.5
NUP54-201ENST00000264883 GAS2L1Q99501 681 aaPredicted RBP11.93□□□□□ -0.5
NUP54-201ENST00000264883 SSX3Q99909 188 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 SELENOIQ9C0D9 397 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 AICDAQ9GZX7 198 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 CHMP1AQ9HD42 196 aaPredicted RBP11.93□□□□□ -0.5
NUP54-201ENST00000264883 LRRK1Q38SD2 2015 aa11.93□□□□□ -0.5
NUP54-201ENST00000264883 MYOFQ9NZM1 2061 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 CD14P08571 375 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 MELTFP08582 738 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 OR2T7P0C7T2 308 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 PGAM2P15259 253 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 NME1P15531 152 aaKnown RBP11.92□□□□□ -0.5
NUP54-201ENST00000264883 NDUFS1P28331 727 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 RAB28P51157 221 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 PDX1P52945 283 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 PRRT3Q5FWE3 981 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 STAC2Q6ZMT1 411 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 ZNF836Q6ZNA1 936 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 OR2L8Q8NGY9 312 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 OR2T27Q8NH04 317 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 PFN4Q8NHR9 129 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 TMEM239Q8WW34 195 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 PMM1Q92871 262 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 SLC35A4Q96G79 324 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 ZNF681Q96N22 645 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 TAAR9Q96RI9 348 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 SEMA6CQ9H3T2 930 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 GFOD1Q9NXC2 390 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 LPAR3Q9UBY5 353 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 STEAP1Q9UHE8 339 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 SLC27A6Q9Y2P4 619 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 ZNF281Q9Y2X9 895 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 WDR45Q9Y484 360 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 TBC1D3EA0A087X179 549 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 A0A0B4J2A0 478 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.92□□□□□ -0.5
NUP54-201ENST00000264883 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.92□□□□□ -0.5
NUP54-201ENST00000264883 hCG_1809904A0A1W2PP81 198 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 A0A1W2PPH5 198 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 A0A1W2PR64 198 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 A0A1W2PRV1 198 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 GLOD5A6NK44 160 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 ZNF208O43345 1280 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 IFNGP01579 166 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 CISD3P0C7P0 127 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 BCL6P41182 706 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 NAA10P41227 235 aaPredicted RBP11.92□□□□□ -0.5
NUP54-201ENST00000264883 OR2B8PP59922 312 aa11.92□□□□□ -0.5
NUP54-201ENST00000264883 NAAAQ02083 359 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms