RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 CT45A8P0DMV1 189 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 CT45A9P0DMV2 189 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 CTSEP14091 401 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 PRKACAP17612 351 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 TACR3P29371 465 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 SKP1P63208 163 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 MRPS10P82664 201 aaKnown RBP11.24□□□□□ -0.61
CHMP3-201ENST00000263856 RAB11BQ15907 218 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 ETFDHQ16134 617 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 CSRP2Q16527 193 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 CT45A2Q5DJT8 189 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 MESTQ5EB52 335 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 FAM122CQ6P4D5 195 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 IQCF2Q8IXL9 164 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 SDR16C5Q8N3Y7 309 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 ZNF321PQ8N8H1 164 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 ACBD4Q8NC06 268 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 CHST4Q8NCG5 386 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 OR1J2Q8NGS2 313 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 FAM46BQ96A09 425 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 CTHRC1Q96CG8 243 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 VSTM2LQ96N03 204 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 ZNF75AQ96N20 296 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 APMAPQ9HDC9 416 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 C2orf16Q68DN1 1984 aa11.24□□□□□ -0.61
CHMP3-201ENST00000263856 IGKV1D-42A0A075B6H8 117 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 K7EQS6 105 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 SCDO00767 359 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 ALOX12BO75342 701 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 VAMP1P23763 118 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 EIF1AXP47813 144 aaKnown RBP11.23□□□□□ -0.61
CHMP3-201ENST00000263856 ZNF660Q6AZW8 331 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-201ENST00000263856 KCTD9Q7L273 389 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 PRSS35Q8N3Z0 413 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 GALNT16Q8N428 558 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 OR1S1Q8NH92 325 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 ZNF417Q8TAU3 575 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 TSPAN32Q96QS1 320 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 SOHLH2Q9NX45 425 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 HRH3Q9Y5N1 445 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 MUC22E2RYF6 1773 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-201ENST00000263856 TMEM82A0PJX8 343 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 ZNF749O43361 778 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 CDC40O60508 579 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHMP3-201ENST00000263856 PRAMEF2O60811 474 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 SDHAP31040 664 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 TPMTP51580 245 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 ZNF74Q16587 644 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 TMEM240Q5SV17 173 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 GLYATL3Q5SZD4 288 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 NKAIN2Q5VXU1 208 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 BVESQ8NE79 360 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 METTL21AQ8WXB1 218 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 GAS2L1Q99501 681 aaPredicted RBP11.23□□□□□ -0.61
CHMP3-201ENST00000263856 EVA1AQ9H8M9 152 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 COMMD9Q9P000 198 aa11.23□□□□□ -0.61
CHMP3-201ENST00000263856 MRPS33Q9Y291 106 aaKnown RBP11.23□□□□□ -0.61
CHMP3-201ENST00000263856 MED12Q93074 2177 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 PRR19A6NJB7 356 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 OR4C45A6NMZ5 311 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 KRBOX1C9JBD0 128 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 ARPC3O15145 178 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 SLC16A7O60669 478 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 OR2A4O95047 310 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 IL5P05113 134 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 RNH1P13489 461 aaKnown RBP11.22□□□□□ -0.61
CHMP3-201ENST00000263856 CTRB1P17538 263 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 S1PR1P21453 382 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 HHEXQ03014 270 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 CTRB2Q6GPI1 263 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 SEZ6L2Q6UXD5 910 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 UNQ6126/PRO20091Q6UXV3 157 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 RHOUQ7L0Q8 258 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 BIVMQ86UB2 503 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 MARCH3Q86UD3 253 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 FAM219AQ8IW50 185 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 CDH26Q8IXH8 852 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 C12orf45Q8N5I9 185 aaPredicted RBP11.22□□□□□ -0.61
CHMP3-201ENST00000263856 EID2Q8N6I1 236 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 OR13H1Q8NG92 308 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 PHYHIPQ92561 330 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 OR2A7Q96R45 310 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 TAS2R4Q9NYW5 299 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 DHDHQ9UQ10 334 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 ETV7Q9Y603 341 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 DENND4AQ7Z401 1863 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 TMEM235A6NFC5 223 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 D6RAR5 112 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 CLDN4O14493 209 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 TOR1AO14656 332 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 OR4E1P0C645 316 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 PRAMEF17Q5VTA0 474 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 LRFN4Q6PJG9 635 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 SLC36A1Q7Z2H8 476 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 GABRG1Q8N1C3 465 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 WNT2BQ93097 391 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 ZNF524Q96C55 264 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 LRRC46Q96FV0 321 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 WBP1Q96G27 269 aa11.22□□□□□ -0.61
CHMP3-201ENST00000263856 LCORQ96JN0 433 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms