RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 RACK1P63244 317 aaKnown RBP9.87□□□□□ -0.83
CD44-201ENST00000263398 HEPHL1Q6MZM0 1159 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 CALHM3Q86XJ0 350 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 ULBP3Q9BZM4 244 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 NRSN2Q9GZP1 204 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 SLC6A17Q9H1V8 727 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 AKIP1Q9NQ31 210 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 A8MXE2 369 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 BET1O15155 118 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 SULT1C4O75897 302 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 POU3F3P20264 500 aaPredicted RBP9.87□□□□□ -0.83
CD44-201ENST00000263398 SRP9P49458 86 aaKnown RBP9.87□□□□□ -0.83
CD44-201ENST00000263398 MAP2K6P52564 334 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 TAS2R30P59541 319 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 STK11Q15831 433 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 SYT9Q86SS6 491 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 MRPL41Q8IXM3 137 aaKnown RBP9.87□□□□□ -0.83
CD44-201ENST00000263398 POC1BQ8TC44 478 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 LINC00615Q96LM1 132 aaPredicted RBP9.87□□□□□ -0.83
CD44-201ENST00000263398 DCLRE1CQ96SD1 692 aaKnown RBP9.87□□□□□ -0.83
CD44-201ENST00000263398 DDOQ99489 341 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 GCM1Q9NP62 436 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 COL24A1Q17RW2 1714 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 CER1O95813 267 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 HIST1H1CP16403 213 aaKnown RBP9.87□□□□□ -0.83
CD44-201ENST00000263398 ACHEP22303 614 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 TGFBR1P36897 503 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 IAH1Q2TAA2 248 aaPredicted RBP9.87□□□□□ -0.83
CD44-201ENST00000263398 USP51Q70EK9 711 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 ANGPTL5Q86XS5 388 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 GJC3Q8NFK1 279 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 PXT1Q8NFP0 134 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 OR51S1Q8NGJ8 323 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 OR52I2Q8NH67 350 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 SLC25A43Q8WUT9 341 aaPredicted RBP9.87□□□□□ -0.83
CD44-201ENST00000263398 BCL7CQ8WUZ0 217 aaPredicted RBP9.87□□□□□ -0.83
CD44-201ENST00000263398 ZNF845Q96IR2 970 aaPredicted RBP9.87□□□□□ -0.83
CD44-201ENST00000263398 DCBLD2Q96PD2 775 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 SLC19A3Q9BZV2 496 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 SCPEP1Q9HB40 452 aa9.87□□□□□ -0.83
CD44-201ENST00000263398 LOXHD1Q8IVV2 1947 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 A0A1B0GX78 115 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 PLSCR5A0PG75 271 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 OR6C6A6NF89 314 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 DOK2O60496 412 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 B4GALT3O60512 393 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 SLC2A10O95528 541 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 IGHEP01854 428 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 SPI1P17947 270 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 EMC4Q5J8M3 183 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 BBS1Q8NFJ9 593 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 RBPMSQ93062 196 aaKnown RBP9.86□□□□□ -0.83
CD44-201ENST00000263398 OR6C1Q96RD1 312 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 FGF20Q9NP95 211 aaPredicted RBP9.86□□□□□ -0.83
CD44-201ENST00000263398 COA3Q9Y2R0 106 aaPredicted RBP9.86□□□□□ -0.83
CD44-201ENST00000263398 RREB1Q92766 1687 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 GPR171O14626 319 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 ZNF780AO75290 641 aaPredicted RBP9.86□□□□□ -0.83
CD44-201ENST00000263398 FABP5Q01469 135 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 CATR1Q13166 79 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 OR2A1Q8NGT9 310 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 UPRTQ96BW1 309 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 RBMXL1Q96E39 390 aaKnown RBP9.86□□□□□ -0.83
CD44-201ENST00000263398 PISDQ9UG56 409 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 SLC23A2Q9UGH3 650 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 NTNG1Q9Y2I2 539 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 A0A087WV62 115 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 CXorf51AA0A1B0GTR3 108 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 A6NL46 340 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 RNF212BA8MTL3 300 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 CEBPZOSA8MTT3 80 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 HBE1P02100 147 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 LPLP06858 475 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 GIPP09681 153 aaPredicted RBP9.86□□□□□ -0.83
CD44-201ENST00000263398 ZNF728P0DKX0 622 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 CD27P26842 260 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 ECI1P42126 302 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 P2RX1P51575 399 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 PMPCAQ10713 525 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 SCARB1Q8WTV0 552 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 CTRCQ99895 268 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 PLAC1Q9HBJ0 212 aa9.86□□□□□ -0.83
CD44-201ENST00000263398 CGGBP1Q9UFW8 167 aaPredicted RBP9.86□□□□□ -0.83
CD44-201ENST00000263398 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 RPS10-NUDT3A0A1W2PQS6 291 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 ZC3H12DA2A288 527 aaKnown RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 FITM1A5D6W6 292 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 UPK1AO00322 258 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 TNFSF12O43508 249 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 ALX3O95076 343 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 SIX6O95475 246 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 CNR1P21554 472 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 SDHAP31040 664 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 RPS10P46783 165 aaKnown RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 DGCR2P98153 550 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 EBPQ15125 230 aaKnown RBP9.85□□□□□ -0.83
CD44-201ENST00000263398 HMGN3Q15651 99 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 NKG7Q16617 165 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 C9orf135Q5VTT2 229 aa9.85□□□□□ -0.83
CD44-201ENST00000263398 TMEM81Q6P7N7 255 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms