RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PDGFAP04085 211 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 ZNF169Q14929 603 aaPredicted RBP20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 KLBQ86Z14 1044 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 SYS1Q8N2H4 156 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 FNDC8Q8TC99 324 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 C4orf36Q96KX1 117 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 FOXN4Q96NZ1 517 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 DCBLD2Q96PD2 775 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 LDAHQ9H6V9 325 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 AIREO43918 545 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 IGHG3P01860 377 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 PSKH1P11801 424 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 CAPZA2P47755 286 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 OR12D2P58182 307 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 SRYQ05066 204 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 SLC26A10Q8NG04 563 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 OR6N2Q8NGY6 317 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 UFD1Q92890 307 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 OR2M2Q96R28 347 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 OR51E2Q9H255 320 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 PAQR5Q9NXK6 330 aaPredicted RBP20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 SPRR3Q9UBC9 169 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 KLHDC2Q9Y2U9 406 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 FLVCR1Q9Y5Y0 555 aa20.35■□□□□ 0.85
SMARCB1-201ENST00000263121 FRYQ5TBA9 3013 aa20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 ZNF432O94892 652 aa20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 HLA-DQA2P01906 255 aa20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 GAAP10253 952 aa20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 RPS3AP61247 264 aaKnown RBP20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 CARD17Q5XLA6 110 aa20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 SLC25A47Q6Q0C1 308 aa20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 Q6ZS92 163 aa20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 FCRLAQ7L513 359 aa20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 VASH1Q7L8A9 365 aaPredicted RBP20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 TMEM123Q8N131 208 aa20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 MRPL48Q96GC5 212 aaKnown RBP20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 TTTY10Q9BZA0 68 aa20.34■□□□□ 0.85
SMARCB1-201ENST00000263121 A0A1W2PPW3 197 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 J3QLW9 94 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 SLC22A1O15245 554 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 ADRB1P08588 477 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 ZNF19P17023 458 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 NFATC3Q12968 1075 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 SPCS2Q15005 226 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 TIMM50Q3ZCQ8 353 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 ZNF684Q5T5D7 378 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 DPY19L4Q7Z388 723 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 OTOSQ8NHW6 89 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 TMEM54Q969K7 222 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 EXO5Q9H790 373 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 TRIM36Q9NQ86 728 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 KLHL9Q9P2J3 617 aa20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 SF3B6Q9Y3B4 125 aaKnown RBP20.33■□□□□ 0.85
SMARCB1-201ENST00000263121 APC2O95996 2303 aa20.33■□□□□ 0.84
SMARCB1-201ENST00000263121 PRR32B1ATL7 298 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 MKRN2OSH3BPM6 223 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 NR2C1P13056 603 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 CPN1P15169 458 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 ALOX5APP20292 161 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 VBP1P61758 197 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 NCS1P62166 190 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 LSM3P62310 102 aaKnown RBP20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 TP53I3Q53FA7 332 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 GLB1L2Q8IW92 636 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 ZFP41Q8N8Y5 198 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 SNX33Q8WV41 574 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 MCHR2Q969V1 340 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 MYCBPQ99417 103 aaPredicted RBP20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 LAMP5Q9UJQ1 280 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 ING1Q9UK53 422 aaPredicted RBP20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 RCE1Q9Y256 329 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 TMEM14AQ9Y6G1 99 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 K7EM74 188 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 ZNF593O00488 134 aaPredicted RBP20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 MAGEB4O15481 346 aaPredicted RBP20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 MPZL1O95297 269 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 HRGP04196 525 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 ID4P47928 161 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 ENTPD1P49961 510 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 ZNF133P52736 654 aaPredicted RBP20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 RASGEF1BQ0VAM2 473 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 RNF128Q8TEB7 428 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 NSMAFQ92636 917 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 WDYHV1Q96HA8 205 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 GLTPQ9NZD2 209 aa20.32■□□□□ 0.84
SMARCB1-201ENST00000263121 PNMA8CA0A1B0GUJ8 204 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 E9PI62 339 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 PHYHO14832 338 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 GPX5O75715 221 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 SYNGR4O95473 234 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 PSMA1P25786 263 aaKnown RBP20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 RPS27P42677 84 aaKnown RBP20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 CRYBB2P43320 205 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 CSNK1A1P48729 337 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 SELENOPP49908 381 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 TAS2R43P59537 309 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 ADAM8P78325 824 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 GPR50Q13585 617 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 MEP1BQ16820 701 aa20.31■□□□□ 0.84
SMARCB1-201ENST00000263121 PCK2Q16822 640 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms