RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 CTLA4P16410 223 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 IGFBP2P18065 325 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 ARF1P84077 181 aaKnown RBP14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 OR7E24Q6IFN5 339 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 ZNF627Q7L945 461 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 BHLHA15Q7RTS1 189 aaPredicted RBP14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 CYB561A3Q8NBI2 242 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 SLC37A3Q8NCC5 494 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 C1orf162Q8NEQ5 155 aaPredicted RBP14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 STEAP2Q8NFT2 490 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 OR1K1Q8NGR3 316 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 RDH12Q96NR8 316 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 PSMG3-AS1Q96PY0 264 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 FOXB1Q99853 325 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 NUAK2Q9H093 628 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 OR10A4Q9H209 315 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 TOR3AQ9H497 397 aa14.6□□□□□ -0.07
CHCHD3-201ENST00000262570 RIIAD1A6NNX1 92 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 DCTN6O00399 190 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 ZNF3P17036 446 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 IL32P24001 234 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 HCFC1P51610 2035 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 CRMP1Q14194 572 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 ETFDHQ16134 617 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 C12orf73Q69YU5 71 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 OR6V1Q8N148 313 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 ACBD4Q8NC06 268 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 NSMAFQ92636 917 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 S100PBPQ96BU1 408 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 TSSK2Q96PF2 358 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 MBOAT4Q96T53 435 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 USB1Q9BQ65 265 aaKnown RBP14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 ACTR6Q9GZN1 396 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 NELFAQ9H3P2 528 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 SMPD3Q9NY59 655 aaPredicted RBP14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 TVP23BQ9NYZ1 205 aa14.59□□□□□ -0.07
CHCHD3-201ENST00000262570 A1L4Q6 167 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 PRSS44E7EML9 344 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 SLC16A7O60669 478 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 CRABP1P29762 137 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 PEX19P40855 299 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 ZNF84P51523 738 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 SNTB1Q13884 538 aaKnown RBP14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 SNAPC1Q16533 368 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 ANKRD16Q6P6B7 361 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 C22orf34Q6ZV56 151 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 ZBTB46Q86UZ6 589 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 BCL2L2Q92843 193 aaPredicted RBP14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 HRASLS5Q96KN8 279 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 SLC38A2Q96QD8 506 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 NMNAT2Q9BZQ4 307 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 SRA1Q9HD15 236 aaKnown RBP14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 RPRD1BQ9NQG5 326 aaKnown RBP14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 TMEM38BQ9NVV0 291 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 B9D1Q9UPM9 204 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 UGT2A1Q9Y4X1 527 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 FKBP7Q9Y680 259 aa14.58□□□□□ -0.08
CHCHD3-201ENST00000262570 UTP20O75691 2785 aaKnown RBP14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 SEC14L2O76054 403 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 PPP3CBP16298 524 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 EFNB1P98172 346 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 DBPQ10586 325 aaPredicted RBP14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 TBRG1Q3YBR2 411 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 NRN1LQ496H8 165 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 ZNF813Q6ZN06 617 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 FOXL2NBQ6ZUU3 175 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 P2RY8Q86VZ1 359 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 C17orf78Q8N4C9 275 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 PTP4A1Q93096 173 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 PRRG3Q9BZD7 231 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 RACGAP1Q9H0H5 632 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 FN3KQ9H479 309 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 ICE1Q9Y2F5 2266 aa14.57□□□□□ -0.08
CHCHD3-201ENST00000262570 DOPEY2Q9Y3R5 2298 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 A0A096LPE4 126 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 IGLV1-36A0A0B4J1U3 117 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 A0A1W2PPZ6 126 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 TUBAL3A6NHL2 446 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 OR5H1A6NKK0 313 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 KHDRBS3O75525 346 aaKnown RBP14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 B4GALT1P15291 398 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 CDAP32320 146 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 PTDSS1P48651 473 aaKnown RBP14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 SLC25A1P53007 311 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 MRPS34P82930 218 aaKnown RBP14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 HIKESHIQ53FT3 197 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 TIMM23BQ5SRD1 257 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 DNM1P34Q6PK57 102 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 DMRTC2Q8IXT2 367 aaPredicted RBP14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 LINC01560Q8TB33 94 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 PLEKHA8Q96JA3 519 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 WFIKKN1Q96NZ8 548 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 VCXQ9H320 206 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 RERGLQ9H628 205 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 FAM118AQ9NWS6 357 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 NDRG3Q9UGV2 375 aa14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 NDRG4Q9ULP0 352 aaKnown RBP14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 COA3Q9Y2R0 106 aaPredicted RBP14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 ANKHD1Q8IWZ3 2542 aaKnown RBP14.56□□□□□ -0.08
CHCHD3-201ENST00000262570 FAM183AA6NL82 134 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms