RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 RNLSQ5VYX0 342 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 DPY19L2P1Q6NXN4 242 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 LHFPL2Q6ZUX7 228 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 SYT11Q9BT88 431 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 CD3EP07766 207 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 MAP2K6P52564 334 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 FAM199XQ6PEV8 388 aaPredicted RBP12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 ANKRD37Q7Z713 158 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 ZNF573Q86YE8 665 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 HDGFL3Q9Y3E1 203 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 A0A1B0GUL6 1792 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 A0A087WV62 115 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 UBBP0CG47 229 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 GTF2H4Q92759 462 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 C3orf30Q96M34 536 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 RPH3ALQ9UNE2 315 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 TMA7Q9Y2S6 64 aaKnown RBP12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 HS3ST1O14792 307 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 HTR2CP28335 458 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 TAS2R19P59542 299 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 TMEM108Q6UXF1 575 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 OR1L3Q8NH93 324 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 ADAMTS14Q8WXS8 1223 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 ABHD6Q9BV23 337 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 ABCG5Q9H222 651 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 LHX9Q9NQ69 397 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 MLXQ9UH92 298 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 LAMB1P07942 1786 aa12.42□□□□□ -0.42
PDGFRB-201ENST00000261799 A0A1B0GTQ1 180 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 HMX3A6NHT5 357 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 BCKDHBP21953 392 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 FOXK2Q01167 660 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 HFEQ30201 348 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 PLK5Q496M5 336 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 DCUN1D4Q92564 292 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 LRP5O75197 1615 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 TSPAN11A1L157 253 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 OR6C6A6NF89 314 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 PPP6CO00743 305 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 ATXN7O15265 892 aaPredicted RBP12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 CAMKMTQ7Z624 323 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 FGF11Q92914 225 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 SORT1Q99523 831 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 MOB1AQ9H8S9 216 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 SERTAD4Q9NUC0 356 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 A0A1W2PR48 441 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 TBPP20226 339 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 DHRS4L2Q6PKH6 230 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 SLC16A11Q8NCK7 471 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 ERVMER34-1Q9H9K5 563 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 CNOT2Q9NZN8 540 aaKnown RBP12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 IFNA10P01566 189 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 IGLV3-25P01717 112 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 SERPINA7P05543 415 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 THBS1P07996 1170 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 CISD3P0C7P0 127 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 EMC4Q5J8M3 183 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 ACER2Q5QJU3 275 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 Q6ZTK2 550 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 C16orf52Q8NHV5 167 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 RIMS4Q9H426 269 aaPredicted RBP12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 NKX1-2Q9UD57 310 aaPredicted RBP12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 MAB21L2Q9Y586 359 aa12.41□□□□□ -0.42
PDGFRB-201ENST00000261799 MEIS3P1A6NDR6 274 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 PPM1DO15297 605 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 P2RX6O15547 441 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 BMP2P12643 396 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 FOLR1P15328 257 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 ANXA7P20073 488 aaKnown RBP12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 MYF6P23409 242 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 RPL34P49207 117 aaKnown RBP12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 SAXO2Q658L1 398 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 PTRH1Q86Y79 214 aaKnown RBP12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 NKAIN3Q8N8D7 197 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 NOX4Q9NPH5 578 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 ATF4P18848 351 aaPredicted RBP12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 BLVRBP30043 206 aaPredicted RBP12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 HLCSP50747 726 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 SRPXP78539 464 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 SLC14A1Q13336 389 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 MPPED2Q15777 294 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 GDPGP1Q6ZNW5 385 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 CATSPERDQ86XM0 798 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 CHDHQ8NE62 594 aaPredicted RBP12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 M1APQ8TC57 530 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 C7orf50Q9BRJ6 194 aaKnown RBP12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 SLC22A11Q9NSA0 550 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 SLCO1C1Q9NYB5 712 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 PIP5K1CO60331 668 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 OR8U8P0C7N1 319 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 MFGE8Q08431 387 aaPredicted RBP12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 TNK1Q13470 666 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 OVCH1Q7RTY7 1134 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 ENTHD1Q8IYW4 607 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 OR2T11Q8NH01 316 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 SECTM1Q8WVN6 248 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 RASD2Q96D21 266 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 EMC7Q9NPA0 242 aa12.4□□□□□ -0.42
PDGFRB-201ENST00000261799 SLC2A1P11166 492 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms