RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 NEIL2Q969S2 332 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 RHOFQ9HBH0 211 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 CUTCQ9NTM9 273 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 LYRM2Q9NU23 88 aaPredicted RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 A0A0U1RQF3 1178 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 A0A1B0GUH1 482 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 SLC31A2O15432 143 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 TUSC2O75896 110 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 TGM1P22735 817 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 ALKBH1Q13686 389 aaKnown RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 OR7A5Q15622 319 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 SHISA6Q6ZSJ9 500 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 MBOAT2Q6ZWT7 520 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 WDR5BQ86VZ2 330 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 AGBL5Q8NDL9 886 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 SELENOIQ9C0D9 397 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 HRASLSQ9HDD0 168 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 DUSP22Q9NRW4 184 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 MRPS2Q9Y399 296 aaKnown RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 ZNF593O00488 134 aaPredicted RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 TIMM8AO60220 97 aaPredicted RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 ZNF888P0CJ79 500 aaPredicted RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 RPL13AP40429 203 aaKnown RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 SPINT3P49223 89 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 P2RX1P51575 399 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 RING1Q06587 406 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 OR8B8Q15620 311 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 TOMM20LQ6UXN7 152 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 FAM57BQ71RH2 274 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 SERINC5Q86VE9 423 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 DMBX1Q8NFW5 382 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 AMBRA1Q9C0C7 1298 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 EPHX3Q9H6B9 360 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 EVA1AQ9H8M9 152 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 TAS2R5Q9NYW4 299 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 A0A087WV62 115 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 GFRA2O00451 464 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 ICAM2P13598 275 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 FCGR2CP31995 323 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 ZNF280AP59817 542 aaPredicted RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 ENDOGQ14249 297 aaKnown RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 GGNBP1Q5YKI7 109 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 KCNG3Q8TAE7 436 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 RLN3Q8WXF3 142 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 TSLPQ969D9 159 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 ZNF566Q969W8 418 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 LMF2Q9BU23 707 aaKnown RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 EDEM2Q9BV94 578 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 ZMAT3Q9HA38 289 aaKnown RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 SLC2A9Q9NRM0 540 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 OR10J4P0C629 311 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 PSMB6P28072 239 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 BLVRBP30043 206 aaPredicted RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 AQP6Q13520 282 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 PHYHIPQ92561 330 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 POM121Q96HA1 1249 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 ARRDC1-AS1Q9H2J1 176 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 RAB22AQ9UL26 194 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 MOKQ9UQ07 419 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 MYH3P11055 1940 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 MYOM1P52179 1685 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 DVL1O14640 695 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 CALCBP10092 127 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 DVL1P1P54792 670 aaPredicted RBP9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 COL9A2Q14055 689 aaPredicted RBP9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 PCK2Q16822 640 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 BAP18Q8IXM2 172 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 OR4F5Q8NH21 305 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 LRFN5Q96NI6 719 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 OR5B2Q96R09 309 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 OR4F4Q96R69 305 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 NECAP2Q9NVZ3 263 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 ADAM29Q9UKF5 820 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 SLC35A3Q9Y2D2 325 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 MED16Q9Y2X0 877 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 NPFFR2Q9Y5X5 522 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 SNRPGP15A8MWD9 76 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 GPR171O14626 319 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 IL1RNP18510 177 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 CCR7P32248 378 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 PTGER1P34995 402 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 PCBP4P57723 403 aaKnown RBP9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 IL34Q6ZMJ4 242 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 S100A7AQ86SG5 101 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 LGI3Q8N145 548 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 OR8D4Q8NGM9 314 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 PLEK2Q9NYT0 353 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 KCNG2Q9UJ96 466 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 RNASEK-C17orf49H0YIS7 233 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 ZNF354AO60765 605 aaPredicted RBP9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 DUSP1P28562 367 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 PMPCAQ10713 525 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 ZNF528Q3MIS6 628 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 SLC36A2Q495M3 483 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 MARCH8Q5T0T0 291 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 CLEC14AQ86T13 490 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 KCNE4Q8WWG9 221 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 ALG12Q9BV10 488 aa9.93□□□□□ -0.82
SLC6A4-201ENST00000261707 PTDSS2Q9BVG9 487 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms