RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 WDR31Q8NA23 367 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 OR52P1PQ8NH57 321 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 CPT1CQ8TCG5 803 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 RNFT2Q96EX2 444 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 SLC47A1Q96FL8 570 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 WDYHV1Q96HA8 205 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF578Q96N58 590 aaPredicted RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 FAM206AQ9NX38 181 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 MYEF2Q9P2K5 600 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 MGAT4AQ9UM21 535 aa4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 NOP16Q9Y3C1 178 aaKnown RBP4.92□□□□□ -1.62
TOPBP1-201ENST00000260810 OR2B3O76000 313 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 BCL10O95999 233 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 PATE4P0C8F1 98 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SELENOPP49908 381 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ERVK-25P63136 954 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SSBP2P81877 361 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SLC25A35Q3KQZ1 300 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 CORO6Q6QEF8 472 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 DUX4L9Q6RFH8 374 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF474Q6S9Z5 364 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 S100A7AQ86SG5 101 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 JAZF1Q86VZ6 243 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF595Q8IYB9 648 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 OR5AS1Q8N127 324 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 RELL2Q8NC24 303 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ABHD3Q8WU67 409 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 KCNE4Q8WWG9 221 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 PPCDCQ96CD2 204 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 HIST1H2AAQ96QV6 131 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 EDEM2Q9BV94 578 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 RNF121Q9H920 327 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 GPN1Q9HCN4 374 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 MS4A12Q9NXJ0 267 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 IL36RNQ9UBH0 155 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 MEMO1Q9Y316 297 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 TEX13CA0A0J9YWL9 993 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ISPDA4D126 451 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 GJE1A6NN92 205 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 IGHG3P01860 377 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 GSTT2BP0CG30 244 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SSR2P43308 183 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 CBX5P45973 191 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 GPR85P60893 370 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF311Q5JNZ3 666 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 DCAF10Q5QP82 559 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 NUP54Q7Z3B4 507 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF575Q86XF7 245 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 TM9SF2Q99805 663 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SLX1AQ9BQ83 275 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 DNAJB9Q9UBS3 223 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 CYB5R1Q9UHQ9 305 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 TMEM5Q9Y2B1 443 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 XKRYO14609 159 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 FAM20BO75063 409 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ATG12O94817 140 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 CPSF4O95639 269 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF708P17019 499 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 FPR3P25089 353 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 DCTDP32321 178 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SELENOVP59797 346 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SPOCK1Q08629 439 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 HEPACAMQ14CZ8 416 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 TRAM1Q15629 374 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 MOGQ16653 247 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 COL28A1Q2UY09 1125 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 NUFIP2Q7Z417 695 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 HIPK1Q86Z02 1210 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 AQP11Q8NBQ7 271 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 OR8K3Q8NH51 312 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 NMNAT3Q96T66 252 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SIAEQ9HAT2 523 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SRA1Q9HD15 236 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 METTL21EPA6NDL7 271 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 RGS5O15539 181 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SELENOFO60613 162 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 F13BP05160 661 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 PITPNAQ00169 270 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF367Q7RTV3 350 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 CDC20BQ86Y33 519 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 KMT5CQ86Y97 462 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 DUSP19Q8WTR2 217 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 GTPBP3Q969Y2 492 aaKnown RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ISOC1Q96CN7 298 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 TEAD3Q99594 435 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 TBL1XR1Q9BZK7 514 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ZNF160Q9HCG1 818 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 FGF20Q9NP95 211 aaPredicted RBP4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 KLHL1Q9NR64 748 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 PRODH2Q9UF12 536 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 B9D1Q9UPM9 204 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 LOXL2Q9Y4K0 774 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 LPAP08519 4548 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 LOC102725191A0A1B0GVB3 256 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SERINC4A6NH21 518 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SLC30A4O14863 429 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ANGPTL1O95841 491 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 ALOX5P09917 674 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 CDAP32320 146 aa4.91□□□□□ -1.62
TOPBP1-201ENST00000260810 SNAP47Q5SQN1 464 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms