RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 GAPDHSO14556 408 aaPredicted RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 B4GALT2O60909 372 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 HSBP1O75506 76 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ENDOD1O94919 500 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 CST4P01036 141 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 AK4P27144 223 aaPredicted RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ITPKBP27987 946 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 IL2RGP31785 369 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 PPIAP62937 165 aaKnown RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 COL9A2Q14055 689 aaPredicted RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 HES1Q14469 280 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 WSCD1Q658N2 575 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 CMTM2Q8TAZ6 248 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ARRDC2Q8TBH0 407 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 LMX1AQ8TE12 382 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TMEM37Q8WXS4 190 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 SCLYQ96I15 445 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 GPR78Q96P69 363 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 KLHDC3Q9BQ90 382 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 MIEN1Q9BRT3 115 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ALG12Q9BV10 488 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC35B3Q9H1N7 401 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ZDHHC4Q9NPG8 344 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TEX264Q9Y6I9 313 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 COLEC10Q9Y6Z7 277 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 WNK3Q9BYP7 1800 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 MYH7P12883 1935 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 NKX6-3A6NJ46 265 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 PPP6CO00743 305 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 GEMIN2O14893 280 aaKnown RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 HCRTR1O43613 425 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 HLA-AP01891 365 aaKnown RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 EVX1P49640 407 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TSPAN31Q12999 210 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TMEM249Q2WGJ8 235 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 NPSR1Q6W5P4 371 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 OVCH1Q7RTY7 1134 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 OR4M1Q8NGD0 313 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 PHOSPHO2Q8TCD6 241 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF160Q9HCG1 818 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 OR6C76A6NM76 312 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 NPIPB8E9PQR5 432 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 H0Y980 276 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 FGF10O15520 208 aaPredicted RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 DNPH1O43598 174 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 MOSPD3O75425 235 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TRBC1P01850 177 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 HLA-HP01893 362 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TIMP2P16035 220 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 AKR1C4P17516 323 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 CD52P31358 61 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ABRAXAS2Q15018 415 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF791Q3KP31 576 aaPredicted RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 FAM174BQ3ZCQ3 159 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 OCIAD2Q56VL3 154 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TPTE2P1Q5T6R2 138 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ST6GALNAC3Q8NDV1 305 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 OR4K2Q8NGD2 314 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 CXorf40AQ8TE69 158 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 GEMIN6Q8WXD5 167 aaKnown RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 WNT8BQ93098 351 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 FAAP24Q9BTP7 215 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 SIX2Q9NPC8 291 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 OR1A1Q9P1Q5 309 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TNRC6CQ9HCJ0 1690 aaKnown RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 MKRN2OSH3BPM6 223 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC35G6P0C7Q6 338 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 PRLHRP49683 370 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ACSM2AQ08AH3 577 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC14A1Q13336 389 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ELAVL1Q15717 326 aaKnown RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 PYCR3Q53H96 274 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 CRB2Q5IJ48 1285 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ACSM2BQ68CK6 577 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ZNF562Q6V9R5 426 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 CFAP52Q8N1V2 620 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 OR13C5Q8NGS8 318 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 RCC1LQ96I51 464 aaKnown RBP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 FAIM2Q9BWQ8 316 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 RNF208Q9H0X6 261 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 C12orf49Q9H741 205 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 NPTNQ9Y639 398 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 MYH13Q9UKX3 1938 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 RIIAD1A6NNX1 92 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 HSD17B6O14756 317 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 CTSLP07711 333 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 YBX3P16989 372 aaKnown RBP eCLIP6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 ACSM3Q53FZ2 586 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 KHDC3LQ587J8 217 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 MESTQ5EB52 335 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 AGBL4Q5VU57 503 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 OPN5Q6U736 354 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC24A5Q71RS6 500 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 FAM169BQ8N8A8 192 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 OR1L6Q8NGR2 347 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 BLNKQ8WV28 456 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 HMGB4Q8WW32 186 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 LCN9Q8WX39 176 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 NRIP2Q9BQI9 281 aa6.22□□□□□ -1.41
PDGFRA-201ENST00000257290 TMPRSS13Q9BYE2 586 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms