RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 TRIM64CA6NLI5 447 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 RAF1P04049 648 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 ZNF92Q03936 586 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 PLCXD1Q9NUJ7 323 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 LUZP4Q9P127 313 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 LOXL2Q9Y4K0 774 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 ZNF195O14628 629 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 RPS23P62266 143 aaKnown RBP17.37■□□□□ 0.37
PTPRE-201ENST00000254667 PEA15Q15121 130 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 LIMS2Q7Z4I7 341 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 BCDIN3DQ7Z5W3 292 aaKnown RBP17.37■□□□□ 0.37
PTPRE-201ENST00000254667 DND1Q8IYX4 353 aaKnown RBP17.37■□□□□ 0.37
PTPRE-201ENST00000254667 GON7Q9BXV9 100 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 PTGER4P35408 488 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 KRBOX4Q5JUW0 171 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 GLYATL3Q5SZD4 288 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 OR2L13Q8N349 312 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 OR5T1Q8NG75 326 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 OR5D18Q8NGL1 313 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 C16orf52Q8NHV5 167 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 KCNE4Q8WWG9 221 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 MALSU1Q96EH3 234 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 HAO2Q9NYQ3 351 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 LRP5LA4QPB2 252 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 LRRC30A6NM36 301 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 B4GALT3O60512 393 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 RGS11O94810 467 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 ATP1B1P05026 303 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 SEMA6DQ8NFY4 1073 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 PIGLQ9Y2B2 252 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 RREB1Q92766 1687 aa17.37■□□□□ 0.37
PTPRE-201ENST00000254667 FRG2CA6NGY1 282 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 STEAP1BQ6NZ63 245 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 PPIL1Q9Y3C6 166 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 HSPB2A8KAH6 182 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 FAM166BA8MTA8 275 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 TSPAN12O95859 305 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 ZNF728P0DKX0 622 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 HSPB2Q16082 182 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 SH2D5Q6ZV89 423 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 NRARPQ7Z6K4 114 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 ABHD6Q9BV23 337 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 GCM1Q9NP62 436 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 DECR2Q9NUI1 292 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 MSTNO14793 375 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 PEX11BO96011 259 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 THEM4Q5T1C6 240 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 SYT9Q86SS6 491 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 RDH10Q8IZV5 341 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 SIRT6Q8N6T7 355 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 ARIH2OSQ8N7S6 290 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 TMEM185AQ8NFB2 350 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 OR51A2Q8NGJ7 313 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 FCRL1Q96LA6 429 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 ARGFXA6NJG6 315 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 UPK1AO00322 258 aa17.36■□□□□ 0.37
PTPRE-201ENST00000254667 ASTLQ6HA08 431 aaPredicted RBP17.36■□□□□ 0.37
PTPRE-201ENST00000254667 ANKRD9Q96BM1 317 aaPredicted RBP17.36■□□□□ 0.37
PTPRE-201ENST00000254667 A0A087WZY1 265 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 PMS2P1A4D2B8 440 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 LIPAP38571 399 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 COMTD1Q86VU5 262 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 DUSP13Q9UII6 198 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 A0A1W2PPH5 198 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 K7EPK0 472 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 CD53P19397 219 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 CHATP28329 748 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 TAS2R30P59541 319 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 HTRA4P83105 476 aaPredicted RBP17.35■□□□□ 0.37
PTPRE-201ENST00000254667 C1orf53Q5VUE5 145 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 FAM71E2Q8N5Q1 922 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 MRGPRX4Q96LA9 322 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 SLC25A19Q9HC21 320 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 CLEC2DQ9UHP7 191 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 KIAA1551Q9HCM1 1747 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 ZAR1LA6NP61 321 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 MED6O75586 246 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 RAB4BP61018 213 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 BTG2P78543 158 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 ACSM1Q08AH1 577 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 HYAL1Q12794 435 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 GLIPR1L1Q6UWM5 242 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 DMBX1Q8NFW5 382 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 CADM4Q8NFZ8 388 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 TSLPQ969D9 159 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 SLC25A21Q9BQT8 299 aaPredicted RBP17.35■□□□□ 0.37
PTPRE-201ENST00000254667 TMEM9BQ9NQ34 198 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 TIMM10BQ9Y5J6 103 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 STRCQ7RTU9 1775 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 SOD1P00441 154 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 CALCBP10092 127 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 GABRG2P18507 467 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 ADPRMQ3LIE5 342 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 OR51D1Q8NGF3 324 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 S100PBPQ96BU1 408 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 MENTQ9BUN1 341 aa17.35■□□□□ 0.37
PTPRE-201ENST00000254667 IL3RAP26951 378 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 ALDH3B1P43353 468 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 DIO1P49895 249 aa17.34■□□□□ 0.37
PTPRE-201ENST00000254667 SLC35A2P78381 396 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms