RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SMAD5Q99717 465 aaKnown RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 SLC6A17Q9H1V8 727 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RYDENQ9NUL5 291 aaKnown RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 HHLA2Q9UM44 414 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 SIGLEC7Q9Y286 467 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 CA5BQ9Y2D0 317 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 PLSCR5A0PG75 271 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 FAM183AA6NL82 134 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RFXAPO00287 272 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 BHLHE40O14503 412 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 LDB3O75112 727 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 PTP4A3O75365 173 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF254O75437 659 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 CHRM2P08172 466 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ATF1P18846 271 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 CNR1P21554 472 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 GSK3AP49840 483 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RAB5CP51148 216 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 DCAF7P61962 342 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 NAAAQ02083 359 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RNF212Q495C1 297 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 HIST2H3AQ71DI3 136 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ADGRE4PQ86SQ3 457 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 KCNRGQ8N5I3 272 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 EXD3Q8N9H8 876 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 LFNGQ8NES3 379 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 THEM6Q8WUY1 208 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ZG16BQ96DA0 208 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 SAT2Q96F10 170 aaPredicted RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RBP7Q96R05 134 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ZFYVE21Q9BQ24 234 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ALG12Q9BV10 488 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 PPP4R1LQ9P1A2 415 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ZMAT5Q9UDW3 170 aaKnown RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RAB22AQ9UL26 194 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 PCDHGA9Q9Y5G4 932 aaKnown RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF208O43345 1280 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 SLC35E2P0CK97 266 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 GP1BBP13224 206 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF20P17024 532 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 S100A2P29034 98 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RBMXP38159 391 aaKnown RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 WASP42768 502 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 SRP9P49458 86 aaKnown RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 MECP2P51608 486 aaKnown RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RAB38P57729 211 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RAB1AP62820 205 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ERVK-25P63136 954 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 SORDQ00796 357 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RUNX2Q13950 521 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ALG10Q5BKT4 473 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 FAM109BQ6ICB4 259 aaPredicted RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RGS7BPQ6MZT1 257 aaPredicted RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 UNQ9370/PRO34162Q6UXP9 181 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 DTWD2Q8NBA8 298 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 OR2L3Q8NG85 312 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 SLC35A4Q96G79 324 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ADGRL4Q9HBW9 690 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 NPDC1Q9NQX5 325 aaPredicted RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 PCSK5Q92824 1860 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 A0A1B0GWA3 101 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 SLC22A23A1A5C7 686 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 GLOD5A6NK44 160 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 TGFBR3LH3BV60 316 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 CYR61O00622 381 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 TLX3O43711 291 aaPredicted RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 OR2T1O43869 369 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 SUSD5O60279 629 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 CTNSO60931 367 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RPP14O95059 124 aaKnown RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 AHSA1O95433 338 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 BPNT1O95861 308 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 FGF2P09038 288 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 PGCP20142 388 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RAD52P43351 418 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 EFNA3P52797 238 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 KIAA1024LP59773 190 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 SCGB2B2Q4G0G5 96 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ANKRD16Q6P6B7 361 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 KANSL1Q7Z3B3 1105 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 BPIFB2Q8N4F0 458 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 OR5J2Q8NH18 312 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ZCCHC10Q8TBK6 192 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 PTX4Q96A99 478 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 OR14A2Q96R54 314 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 CLCC1Q96S66 551 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RGCCQ9H4X1 137 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 C6orf106Q9H6K1 298 aaPredicted RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 ASF1BQ9NVP2 202 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 PCDHB10Q9UN67 800 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 KCNK7Q9Y2U2 307 aa3.78□□□□□ -1.8
UBE4A-201ENST00000252108 RBM7Q9Y580 266 aaKnown RBP3.78□□□□□ -1.8
UBE4A-201ENST00000252108 TMEM150CB9EJG8 249 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 STMND1H3BQB6 276 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 MAGEB4O15481 346 aaPredicted RBP3.77□□□□□ -1.81
UBE4A-201ENST00000252108 MT-ATP6P00846 226 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 WNT1P04628 370 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 FCER2P06734 321 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 RAB6AP20340 208 aa3.77□□□□□ -1.81
UBE4A-201ENST00000252108 ACHEP22303 614 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms