RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 OR13C7P0DN81 318 aa12.21□□□□□ -0.45
NEK9-201ENST00000238616 FOXC1Q12948 553 aa12.21□□□□□ -0.45
NEK9-201ENST00000238616 SELPLGQ14242 412 aa12.21□□□□□ -0.45
NEK9-201ENST00000238616 LRRC28Q86X40 367 aaPredicted RBP12.21□□□□□ -0.45
NEK9-201ENST00000238616 OR56B1Q8NGI3 324 aa12.21□□□□□ -0.45
NEK9-201ENST00000238616 ZNF576Q9H609 170 aa12.21□□□□□ -0.45
NEK9-201ENST00000238616 SLC16A6O15403 523 aa12.21□□□□□ -0.45
NEK9-201ENST00000238616 LAP3P28838 519 aa12.21□□□□□ -0.45
NEK9-201ENST00000238616 SOX18P35713 384 aa12.21□□□□□ -0.45
NEK9-201ENST00000238616 OR10K2Q6IF99 312 aa12.21□□□□□ -0.45
NEK9-201ENST00000238616 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.21□□□□□ -0.45
NEK9-201ENST00000238616 GPR32P1Q8NGA4 272 aa12.21□□□□□ -0.45
NEK9-201ENST00000238616 ARPC3O15145 178 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 FABP1P07148 127 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 MYF6P23409 242 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 S100A4P26447 101 aaKnown RBP12.21□□□□□ -0.46
NEK9-201ENST00000238616 CTBSQ01459 385 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 FAM78AQ5JUQ0 283 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 TBPL2Q6SJ96 375 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 SYT9Q86SS6 491 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 EDEM2Q9BV94 578 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 SPO11Q9Y5K1 396 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 RFC3P40938 356 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 MFAP5Q13361 173 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 WDR5BQ86VZ2 330 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 SLC35F3Q8IY50 421 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 ZNF595Q8IYB9 648 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 SLCO2A1Q92959 643 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 SLC35E1Q96K37 410 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 TMEM208Q9BTX3 173 aa12.21□□□□□ -0.46
NEK9-201ENST00000238616 NAP1L6A6NFF2 107 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 SPP1P10451 314 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 HNRNPA1L2Q32P51 320 aaKnown RBP12.2□□□□□ -0.46
NEK9-201ENST00000238616 ZNF785A8K8V0 405 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 FOXA1P55317 472 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 ISCA2Q86U28 154 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 KIAA1958Q8N8K9 716 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 SMIM12Q96EX1 92 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 SLC45A3Q96JT2 553 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 COL11A1P12107 1806 aaPredicted RBP12.2□□□□□ -0.46
NEK9-201ENST00000238616 NUDT19A8MXV4 375 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 AIFM1O95831 613 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 PPIAP62937 165 aaKnown RBP12.2□□□□□ -0.46
NEK9-201ENST00000238616 LEXMQ3ZCV2 418 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 TMEM230Q96A57 120 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 OSGIN1Q9UJX0 560 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 IGHV3-20A0A0C4DH32 117 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 ERHP84090 104 aaKnown RBP12.2□□□□□ -0.46
NEK9-201ENST00000238616 UMODL1-AS1Q8N2C9 162 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 TGIF2Q9GZN2 237 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 RCE1Q9Y256 329 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 ALOX12BO75342 701 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 EN2P19622 333 aaPredicted RBP12.2□□□□□ -0.46
NEK9-201ENST00000238616 NPY4RP50391 375 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 RAP2BP61225 183 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 RBMS2Q15434 407 aaKnown RBP12.2□□□□□ -0.46
NEK9-201ENST00000238616 LYPD8Q6UX82 237 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 DEFB123Q8N688 67 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 CHST6Q9GZX3 395 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 BANF2Q9H503 90 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 HBE1P02100 147 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 GLI4P10075 376 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 WDR5P61964 334 aaKnown RBP12.2□□□□□ -0.46
NEK9-201ENST00000238616 ACSM1Q08AH1 577 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 TATDN3Q17R31 274 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 MARCH3Q86UD3 253 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 GPR26Q8NDV2 337 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 METTL17Q9H7H0 456 aaPredicted RBP12.2□□□□□ -0.46
NEK9-201ENST00000238616 TRBV4-1A0A0J9YWV2 114 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 OR6C76A6NM76 312 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 ZNF814B7Z6K7 855 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 GLYATL3Q5SZD4 288 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 OR52H1Q8NGJ2 320 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 OR13C9Q8NGT0 318 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 FNDC8Q8TC99 324 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 SRRQ9GZT4 340 aa12.2□□□□□ -0.46
NEK9-201ENST00000238616 MYOGP15173 224 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 ALG12Q9BV10 488 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 ZMAT5Q9UDW3 170 aaKnown RBP12.19□□□□□ -0.46
NEK9-201ENST00000238616 VWA2Q5GFL6 755 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 TP53INP2Q8IXH6 220 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 DTWD1Q8N5C7 304 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 RAB6CQ9H0N0 254 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 I6L893 689 aaPredicted RBP12.19□□□□□ -0.46
NEK9-201ENST00000238616 CSF3P09919 207 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 JAG1P78504 1218 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 PARS2Q7L3T8 475 aaKnown RBP12.19□□□□□ -0.46
NEK9-201ENST00000238616 NMNAT3Q96T66 252 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 RANGRFQ9HD47 186 aaPredicted RBP12.19□□□□□ -0.46
NEK9-201ENST00000238616 PRAMEF25A6NGN4 478 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 CYTIPO60759 359 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 HTR2CP28335 458 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 PRAMEF5Q5TYX0 476 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 PRAMEF6Q5VXH4 476 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 TMEM200AQ86VY9 491 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 OR5M9Q8NGP3 310 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 CD200R1Q8TD46 325 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 SMLR1H3BR10 107 aa12.19□□□□□ -0.46
NEK9-201ENST00000238616 DNASE2O00115 360 aaPredicted RBP12.19□□□□□ -0.46
NEK9-201ENST00000238616 EMC6Q9BV81 110 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms