RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 PPICP45877 212 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 CCR4P51679 360 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 MOGAT2Q3SYC2 334 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 OR2T2Q6IF00 324 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 EIF5AL1Q6IS14 154 aaKnown RBP11.85□□□□□ -0.51
MSH2-201ENST00000233146 ARHGAP11AQ6P4F7 1023 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 TRAPPC5Q8IUR0 188 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 ACOT4Q8N9L9 421 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 OR13D1Q8NGV5 346 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 IFI44Q8TCB0 444 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 ASB11Q8WXH4 323 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 MYADMQ96S97 322 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 ADGRL4Q9HBW9 690 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 ICKQ9UPZ9 632 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 DUXAA6NLW8 204 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 PAPLNO95428 1278 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 VNN2O95498 520 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 HLA-AP01891 365 aaKnown RBP11.85□□□□□ -0.51
MSH2-201ENST00000233146 F11P03951 625 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 NDUFV2P19404 249 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 ACRV1P26436 265 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 RPS13P62277 151 aaKnown RBP11.85□□□□□ -0.51
MSH2-201ENST00000233146 SKP1P63208 163 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 PIP5KL1Q5T9C9 394 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 TMPPEQ6ZT21 453 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 DCXRQ7Z4W1 244 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 DND1Q8IYX4 353 aaKnown RBP11.85□□□□□ -0.51
MSH2-201ENST00000233146 TMEM86AQ8N2M4 240 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 OR10A7Q8NGE5 316 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 OR8S1Q8NH09 359 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 SLC6A16Q9GZN6 736 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 OR51V1Q9H2C8 321 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 MYNNQ9NPC7 610 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 SLC22A31A6NKX4 558 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 RPN2P04844 631 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 CD1AP06126 327 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 CXCL1P09341 107 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 TBX4P57082 545 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 RAB35Q15286 201 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 YOD1Q5VVQ6 348 aaPredicted RBP11.85□□□□□ -0.51
MSH2-201ENST00000233146 KHDRBS2Q5VWX1 349 aaKnown RBP11.85□□□□□ -0.51
MSH2-201ENST00000233146 FBXO46Q6PJ61 603 aaPredicted RBP11.85□□□□□ -0.51
MSH2-201ENST00000233146 COMMD6Q7Z4G1 85 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 SMPDL3AQ92484 453 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 FAM122AQ96E09 287 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 SEPT5Q99719 369 aaPredicted RBP11.85□□□□□ -0.51
MSH2-201ENST00000233146 PLA2G2EQ9NZK7 142 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 FBXO7Q9Y3I1 522 aa11.85□□□□□ -0.51
MSH2-201ENST00000233146 MTCL1Q9Y4B5 1905 aaKnown RBP11.84□□□□□ -0.51
MSH2-201ENST00000233146 A0A087WZY1 265 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 TRBV5-4A0A0C4DH59 114 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 B4GALT2O60909 372 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 GGCTO75223 188 aaKnown RBP11.84□□□□□ -0.51
MSH2-201ENST00000233146 ZBTB25P24278 435 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 SERPINF1P36955 418 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 GPR4P46093 362 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 OR1G1P47890 313 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 TAS2R41P59536 307 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 TAS2R50P59544 299 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 ZNF283Q8N7M2 679 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 SLC25A43Q8WUT9 341 aaPredicted RBP11.84□□□□□ -0.51
MSH2-201ENST00000233146 RSC1A1Q92681 617 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 PELI1Q96FA3 418 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 DTD2Q96FN9 168 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 OR2M4Q96R27 311 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 STACQ99469 402 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 CACNG4Q9UBN1 327 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 LOC100509620A0A075B734 347 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 A0A0D9SEW6 157 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 MEIS3P1A6NDR6 274 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 HOXA2O43364 376 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 GMFGO60234 142 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 CDC14BO60729 498 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 CBR3O75828 277 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 SNCAP37840 140 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 ELOBQ15370 118 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 TP53I3Q53FA7 332 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 GABRG1Q8N1C3 465 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 Q8WTZ3 238 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 CAMK1GQ96NX5 476 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 POTEKPQ9BYX7 375 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 OR2S2Q9NQN1 319 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 TAAR2Q9P1P5 351 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 HS3ST3B1Q9Y662 390 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 PLXNB3Q9ULL4 1909 aa11.84□□□□□ -0.51
MSH2-201ENST00000233146 TRGC2P03986 189 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 GABRR1P24046 479 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 PCSK1P29120 753 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 PPP2R1BP30154 601 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 CDKN1BP46527 198 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 UCP2P55851 309 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 SIRPAP78324 504 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 SSBP1Q04837 148 aaKnown RBP11.83□□□□□ -0.52
MSH2-201ENST00000233146 EGR3Q06889 387 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 GUK1Q16774 197 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 Q6ZRG5 221 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 ABHD5Q8WTS1 349 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 MITD1Q8WV92 249 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 PDCD1LG2Q9BQ51 273 aa11.83□□□□□ -0.52
MSH2-201ENST00000233146 SRMSQ9H3Y6 488 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms