RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 Q8N9G6 341 aaPredicted RBP4.07□□□□□ -1.76
CHD9-201ENST00000219084 TMEM40Q8WWA1 233 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 UCN3Q969E3 161 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 SLCO4A1Q96BD0 722 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 PIGQQ9BRB3 760 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 GLIPR2Q9H4G4 154 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 CLDND1Q9NY35 253 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 SLAMF8Q9P0V8 285 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 TAAR2Q9P1P5 351 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 CACNG4Q9UBN1 327 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 GPR55Q9Y2T6 319 aaPredicted RBP4.07□□□□□ -1.76
CHD9-201ENST00000219084 ACTL7AQ9Y615 435 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 LTBP4Q8N2S1 1624 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 HMX2A2RU54 273 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 MEN1O00255 615 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 RTCAO00442 366 aaKnown RBP4.07□□□□□ -1.76
CHD9-201ENST00000219084 ZNF749O43361 778 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 FOSL2P15408 326 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 SDHAP31040 664 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 GSK3AP49840 483 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 SORDQ00796 357 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 ZNF85Q03923 595 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 OR7A5Q15622 319 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 FAM69BQ5VUD6 431 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 Q6ZTK2 550 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 TMEM25Q86YD3 366 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 TEX19Q8NA77 164 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 C3orf58Q8NDZ4 430 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 OR13C8Q8NGS7 320 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 CXorf58Q96LI9 332 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 RBM24Q9BX46 236 aaKnown RBP4.07□□□□□ -1.76
CHD9-201ENST00000219084 PLK3Q9H4B4 646 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 ALKBH4Q9NXW9 302 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 NCDNQ9UBB6 729 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 C19orf53Q9UNZ5 99 aaPredicted RBP4.07□□□□□ -1.76
CHD9-201ENST00000219084 NYNRINQ9P2P1 1898 aaKnown RBP4.07□□□□□ -1.76
CHD9-201ENST00000219084 HMSDA8MTL9 139 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 LINC01387J3KSC0 135 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 LGALS8O00214 317 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 CTNSO60931 367 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 TSPAN12O95859 305 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 CPN1P15169 458 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 FOLR1P15328 257 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 ANXA7P20073 488 aaKnown RBP4.07□□□□□ -1.76
CHD9-201ENST00000219084 MAOBP27338 520 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 RPS19P39019 145 aaKnown RBP4.07□□□□□ -1.76
CHD9-201ENST00000219084 FASLGP48023 281 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 GABREP78334 506 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 PAN3Q58A45 887 aaKnown RBP4.07□□□□□ -1.76
CHD9-201ENST00000219084 FAM74A1Q5RGS3 127 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 SLC25A30Q5SVS4 291 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 Q6ZSR6 202 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 CALHM3Q86XJ0 350 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 VRK2Q86Y07 508 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 ZNF366Q8N895 744 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 ZDHHC22Q8N966 263 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 HPSE2Q8WWQ2 592 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 DCBLD2Q96PD2 775 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 IL17FQ96PD4 163 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 S1PR5Q9H228 398 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 HRH4Q9H3N8 390 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 ATP13A2Q9NQ11 1180 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 CA5BQ9Y2D0 317 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 MRPS28Q9Y2Q9 187 aaKnown RBP4.07□□□□□ -1.76
CHD9-201ENST00000219084 PRSS21Q9Y6M0 314 aa4.07□□□□□ -1.76
CHD9-201ENST00000219084 LOC105369274A0A096LPK9 316 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 KDM4EB2RXH2 506 aaPredicted RBP4.06□□□□□ -1.76
CHD9-201ENST00000219084 HMGN4O00479 90 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 HOXC11O43248 304 aaPredicted RBP4.06□□□□□ -1.76
CHD9-201ENST00000219084 RPL35P42766 123 aaKnown RBP4.06□□□□□ -1.76
CHD9-201ENST00000219084 RRADP55042 308 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 TRNP1Q6NT89 227 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 ABHD17CQ6PCB6 329 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 OR4N4Q8N0Y3 316 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 LNX2Q8N448 690 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 ZNF561Q8N587 486 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 SLC39A7Q92504 469 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 PAPOLGQ9BWT3 736 aaKnown RBP4.06□□□□□ -1.76
CHD9-201ENST00000219084 PLEK2Q9NYT0 353 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 OR5H14A6NHG9 310 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 BCL2L11O43521 198 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 SLC16A7O60669 478 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 PRR35P0CG20 571 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 POU3F2P20265 443 aaPredicted RBP4.06□□□□□ -1.76
CHD9-201ENST00000219084 SNCAP37840 140 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 VASPP50552 380 aaPredicted RBP4.06□□□□□ -1.76
CHD9-201ENST00000219084 ELAVL1Q15717 326 aaKnown RBP4.06□□□□□ -1.76
CHD9-201ENST00000219084 TFAP2EQ6VUC0 442 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 PRICKLE2Q7Z3G6 844 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 CTU1Q7Z7A3 348 aaKnown RBP4.06□□□□□ -1.76
CHD9-201ENST00000219084 SLC38A6Q8IZM9 456 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 LMNTD1Q8N9Z9 388 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 KDF1Q8NAX2 398 aaPredicted RBP4.06□□□□□ -1.76
CHD9-201ENST00000219084 CXorf36Q9H7Y0 433 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 EXO1Q9UQ84 846 aaKnown RBP4.06□□□□□ -1.76
CHD9-201ENST00000219084 MGAMO43451 1857 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 SERPINE3A8MV23 424 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 ZNF587BE7ETH6 402 aa4.06□□□□□ -1.76
CHD9-201ENST00000219084 SMAD6O43541 496 aaKnown RBP4.06□□□□□ -1.76
CHD9-201ENST00000219084 HPNP05981 417 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms