RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 RORAP35398 523 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 PBX2P40425 430 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 GABRA4P48169 554 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 ACTBP60709 375 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 ACTG1P63261 375 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 SLC17A1Q14916 467 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 TEX30Q5JUR7 227 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 C9orf50Q5SZB4 431 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 NKAIN2Q5VXU1 208 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 KIAA0895LQ68EN5 471 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 FAM166AQ6J272 317 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 RGS7BPQ6MZT1 257 aaPredicted RBP12.03□□□□□ -0.48
SRP54-201ENST00000216774 TMUB2Q71RG4 321 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 ZNF679Q8IYX0 411 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 GALNT11Q8NCW6 608 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 OR4D10Q8NGI6 311 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 SCARB1Q8WTV0 552 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 AMELYQ99218 206 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 S1PR5Q9H228 398 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 PPA2Q9H2U2 334 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 ELOVL3Q9HB03 270 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 MED11Q9P086 117 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 SESN1Q9Y6P5 492 aa12.03□□□□□ -0.48
SRP54-201ENST00000216774 TMEM131Q92545 1883 aa12.02□□□□□ -0.48
SRP54-201ENST00000216774 TRAV36DV7A0A075B6V5 113 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 TRAV18A0A075B6X5 111 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 EPOPA6NHQ4 379 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 BET1O15155 118 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 ARPC5O15511 151 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 MT-ATP6P00846 226 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 NMBP08949 121 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 CXCR1P25024 350 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 CCKBRP32239 447 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 RPS27P42677 84 aaKnown RBP12.02□□□□□ -0.49
SRP54-201ENST00000216774 GMFBP60983 142 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 ROM1Q03395 351 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 ODF4Q2M2E3 257 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 C2orf76Q3KRA6 126 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.02□□□□□ -0.49
SRP54-201ENST00000216774 PRSS42Q7Z5A4 293 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 MUC20Q8N307 709 aaPredicted RBP12.02□□□□□ -0.49
SRP54-201ENST00000216774 FRMD1Q8N878 549 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 CLEC1AQ8NC01 280 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 OR51S1Q8NGJ8 323 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 RNF128Q8TEB7 428 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 MRPL38Q96DV4 380 aaKnown RBP12.02□□□□□ -0.49
SRP54-201ENST00000216774 WDR89Q96FK6 387 aaPredicted RBP12.02□□□□□ -0.49
SRP54-201ENST00000216774 APMAPQ9HDC9 416 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 TMEM184BQ9Y519 407 aaPredicted RBP12.02□□□□□ -0.49
SRP54-201ENST00000216774 KCNMB2Q9Y691 235 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 CHURC1-FNTBB4DL54 471 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 SULT1C2O00338 296 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 ZNF35P13682 527 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 CD1CP29017 333 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 FNTBP49356 437 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 ZNF117Q03924 483 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 MEP1BQ16820 701 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 SLC18B1Q6NT16 456 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 LRRC69Q6ZNQ3 347 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 MAMDC2Q7Z304 686 aaPredicted RBP12.02□□□□□ -0.49
SRP54-201ENST00000216774 SLC51BQ86UW2 128 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 METTL27Q8N6F8 245 aaPredicted RBP12.02□□□□□ -0.49
SRP54-201ENST00000216774 GPX8Q8TED1 209 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 TNFAIP8L1Q8WVP5 186 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 C1orf198Q9H425 327 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 LANCL2Q9NS86 450 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 UPB1Q9UBR1 384 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 EPHA6Q9UF33 1036 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 MMP17Q9ULZ9 603 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 MMACHCQ9Y4U1 282 aa12.02□□□□□ -0.49
SRP54-201ENST00000216774 PRSS37A4D1T9 235 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 FITM1A5D6W6 292 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 GOSR2O14653 212 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 GPANK1O95872 356 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 WNT11O96014 354 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 IGLV3-19P01714 112 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 PROS1P07225 676 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 GABRA1P14867 456 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 FASLGP48023 281 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 MAZP56270 477 aaKnown RBP12.01□□□□□ -0.49
SRP54-201ENST00000216774 GUCA2AQ02747 115 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 SGCBQ16585 318 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 C2orf68Q2NKX9 166 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 SFRP5Q5T4F7 317 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 STEAP1BQ6NZ63 245 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 TSSK4Q6SA08 328 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 BIVMQ86UB2 503 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 CDH26Q8IXH8 852 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 ZNF321PQ8N8H1 164 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 METTL21AQ8WXB1 218 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 ADOQ96SZ5 270 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 LRRC61Q9BV99 259 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 UCK1Q9HA47 277 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 PNO1Q9NRX1 252 aaKnown RBP12.01□□□□□ -0.49
SRP54-201ENST00000216774 CKLFQ9UBR5 152 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 B9D1Q9UPM9 204 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 MPDZO75970 2070 aa12.01□□□□□ -0.49
SRP54-201ENST00000216774 HCRTR2O43614 444 aa12□□□□□ -0.49
SRP54-201ENST00000216774 ICOSLGO75144 302 aa12□□□□□ -0.49
SRP54-201ENST00000216774 HLA-DQA2P01906 255 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms