RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 PM20D2Q8IYS1 436 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 BPIFB2Q8N4F0 458 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 FAM3CQ92520 227 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 CRB3Q9BUF7 120 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 ELOVL3Q9HB03 270 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 GRHPRQ9UBQ7 328 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 GMEB2Q9UKD1 530 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 NPTNQ9Y639 398 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 SDK2Q58EX2 2172 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 GLSO94925 669 aaPredicted RBP15.22■□□□□ 0.03
CTDP1-201ENST00000075430 BDKRB2P30411 391 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 POU4F2Q12837 409 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 SLC35F3Q8IY50 421 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 USB1Q9BQ65 265 aaKnown RBP15.22■□□□□ 0.03
CTDP1-201ENST00000075430 APMAPQ9HDC9 416 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 STEAP1Q9UHE8 339 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 GSTZ1O43708 216 aaPredicted RBP15.22■□□□□ 0.03
CTDP1-201ENST00000075430 AKR7A3O95154 331 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 RAG2P55895 527 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 BTG2P78543 158 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 TFF2Q03403 129 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 ALG10Q5BKT4 473 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 FAM3DQ96BQ1 224 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 CYYR1Q96J86 154 aa15.22■□□□□ 0.03
CTDP1-201ENST00000075430 C19orf53Q9UNZ5 99 aaPredicted RBP15.22■□□□□ 0.03
CTDP1-201ENST00000075430 GGT3PA6NGU5 568 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 CYB5AP00167 134 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 FGL1Q08830 312 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 RPL13AP3Q6NVV1 102 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 PUSL1Q8N0Z8 303 aaKnown RBP15.21■□□□□ 0.03
CTDP1-201ENST00000075430 SPICQ8N5J4 248 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 RCBTB1Q8NDN9 531 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 OR51A2Q8NGJ7 313 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 CHRNA9Q9UGM1 479 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 AGR2O95994 175 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 TACSTD2P09758 323 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 ST6GAL1P15907 406 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 BAIAP2L2Q6UXY1 529 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 SLC16A13Q7RTY0 426 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 ROBO4Q8WZ75 1007 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 COLEC10Q9Y6Z7 277 aa15.21■□□□□ 0.03
CTDP1-201ENST00000075430 CHD9Q3L8U1 2897 aa15.21■□□□□ 0.02
CTDP1-201ENST00000075430 PRKXP51817 358 aa15.21■□□□□ 0.02
CTDP1-201ENST00000075430 AGBL4Q5VU57 503 aa15.21■□□□□ 0.02
CTDP1-201ENST00000075430 TMPRSS9Q7Z410 1059 aa15.21■□□□□ 0.02
CTDP1-201ENST00000075430 COMMD2Q86X83 199 aa15.21■□□□□ 0.02
CTDP1-201ENST00000075430 OR14A16Q8NHC5 309 aa15.21■□□□□ 0.02
CTDP1-201ENST00000075430 HRASLS2Q9NWW9 162 aa15.21■□□□□ 0.02
CTDP1-201ENST00000075430 OR6C76A6NM76 312 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 SULT1C2O00338 296 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 TMEM52BQ4KMG9 183 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 H3F3CQ6NXT2 135 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 ADAMTSL4Q6UY14 1074 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 GABRG1Q8N1C3 465 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 GTPBP8Q8N3Z3 284 aaPredicted RBP15.2■□□□□ 0.02
CTDP1-201ENST00000075430 INO80EQ8NBZ0 244 aaPredicted RBP15.2■□□□□ 0.02
CTDP1-201ENST00000075430 NANPQ8TBE9 248 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 NUDCD2Q8WVJ2 157 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 MTIF3Q9H2K0 278 aaKnown RBP15.2■□□□□ 0.02
CTDP1-201ENST00000075430 MED19A0JLT2 244 aaPredicted RBP15.2■□□□□ 0.02
CTDP1-201ENST00000075430 CTAG2O75638 210 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 B3GALNT1O75752 331 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 GPR75O95800 540 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 OPN1LWP04000 364 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 RAB40ALP0C0E4 278 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 LINC00271P0C7V0 271 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 ERGP11308 486 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 MAOAP21397 527 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 ULK3Q6PHR2 472 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 PARM1Q6UWI2 310 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 OVCH2Q7RTZ1 564 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 OR2G2Q8NGZ5 317 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 RAB40AQ8WXH6 277 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 ZBTB8AQ96BR9 441 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 MBD2Q9UBB5 411 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 ATPIF1Q9UII2 106 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 SPTBN5Q9NRC6 3674 aaKnown RBP15.2■□□□□ 0.02
CTDP1-201ENST00000075430 A0A1B0GW55 424 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 H7C417 338 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 DUX4L2P0CJ85 424 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 DUX4L3P0CJ86 424 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 DUX4L4P0CJ87 422 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 DUX4L5P0CJ88 424 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 DUX4L6P0CJ89 424 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 DUX4L7P0CJ90 424 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 HOXB2P14652 356 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 TGIF1Q15583 401 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 SWI5Q1ZZU3 235 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 MOGAT2Q3SYC2 334 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 POMGNT2Q8NAT1 580 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 FANCFQ9NPI8 374 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 DUX4Q9UBX2 424 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 MTFP1Q9UDX5 166 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 ENTPD2Q9Y5L3 495 aa15.2■□□□□ 0.02
CTDP1-201ENST00000075430 BET1O15155 118 aa15.19■□□□□ 0.02
CTDP1-201ENST00000075430 OIP5O43482 229 aa15.19■□□□□ 0.02
CTDP1-201ENST00000075430 BRINP1O60477 761 aa15.19■□□□□ 0.02
CTDP1-201ENST00000075430 OR2A4O95047 310 aa15.19■□□□□ 0.02
CTDP1-201ENST00000075430 LYPD3O95274 346 aa15.19■□□□□ 0.02
CTDP1-201ENST00000075430 HPP00738 406 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms