RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PCDHGA9Q9Y5G4 932 aaKnown RBP7.44□□□□□ -1.22
VAMP3-201ENST00000054666 ETV7Q9Y603 341 aa7.44□□□□□ -1.22
VAMP3-201ENST00000054666 MYO15AQ9UKN7 3530 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 ARPC4-TTLL3A0A0A6YYG9 625 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 A0A0B4J293 547 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 H3BML4 177 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 GPR171O14626 319 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 TP53I11O14683 189 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 LANCL1O43813 399 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 OR2J2O76002 312 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 WISP1O95388 367 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 CD3GP09693 182 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 RAB40ALP0C0E4 278 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 TDGF1P13385 188 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 ARSBP15848 533 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 DLX5P56178 289 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 POU3F1Q03052 451 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 SLC17A1Q14916 467 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 BTBD16Q32M84 506 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 TRIM61Q5EBN2 209 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 MRPL14Q6P1L8 145 aaKnown RBP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 DEFB123Q8N688 67 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 OR10G3Q8NGC4 313 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 OR2I1PQ8NGU4 316 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 SMIM4Q8WVI0 70 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 RAB40AQ8WXH6 277 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 ASB10Q8WXI3 467 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 YIPF5Q969M3 257 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 RNF166Q96A37 237 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 SPACA9Q96E40 222 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 ST6GAL2Q96JF0 529 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 ARL5BQ96KC2 179 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 DMRTB1Q96MA1 342 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 CMKLR1Q99788 373 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 ING3Q9NXR8 418 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 COPZ2Q9P299 210 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 CDV3Q9UKY7 258 aaKnown RBP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 VCANP13611 3396 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 PCNX3Q9H6A9 2034 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 LAMA1P25391 3075 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 TMEM221A6NGB7 291 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 TMEM200CA6NKL6 621 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 GSTZ1O43708 216 aaPredicted RBP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 DHFRP00374 187 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 CD2P06729 351 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 SYPP08247 313 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 FBXO45P0C2W1 286 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 IFNGR1P15260 489 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 IL11P20809 199 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 MAGEB1P43366 347 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 CCR9P51686 369 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 RAB25P57735 213 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 AP3S2P59780 193 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 BTG1P62324 171 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 MRPS10P82664 201 aaKnown RBP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 DGCR2P98153 550 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 HSF1Q00613 529 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 CD83Q01151 205 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 ODF4Q2M2E3 257 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 PLPPR5Q32ZL2 321 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 WDR38Q5JTN6 314 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 TMEM69Q5SWH9 247 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 FDX2Q6P4F2 183 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 ESPNLQ6ZVH7 1005 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 FCRLAQ7L513 359 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 CMTM4Q8IZR5 234 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 OR4K17Q8NGC6 315 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 OR52N5Q8NH56 324 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 RNF128Q8TEB7 428 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 C15orf40Q8WUR7 153 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 RNF138Q8WVD3 245 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 AKAP1Q92667 903 aaKnown RBP eCLIP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 MR1Q95460 341 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 S100A16Q96FQ6 103 aaKnown RBP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 AMELYQ99218 206 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 GFI1Q99684 422 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 GTPBP2Q9BX10 602 aaKnown RBP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 POTEKPQ9BYX7 375 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 PTGES2Q9H7Z7 377 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 MRPL22Q9NWU5 206 aaKnown RBP7.43□□□□□ -1.22
VAMP3-201ENST00000054666 B3GALT5Q9Y2C3 310 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 N6AMT1Q9Y5N5 214 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 NUBP2Q9Y5Y2 271 aa7.43□□□□□ -1.22
VAMP3-201ENST00000054666 IGLV3-32A0A0A0MS00 114 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 A0A1B0GTH9 108 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 A0A1W2PNV4 684 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 TRABD2BA6NFA1 517 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 ETV2O00321 342 aaPredicted RBP7.42□□□□□ -1.22
VAMP3-201ENST00000054666 MAS1P04201 325 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 YES1P07947 543 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 HLA-DOBP13765 273 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 DPP4P27487 766 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 SRP9P49458 86 aaKnown RBP7.42□□□□□ -1.22
VAMP3-201ENST00000054666 SCAND1P57086 179 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 ZXDAP98168 799 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 ROM1Q03395 351 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 SLC25A53Q5H9E4 307 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 SLC22A10Q63ZE4 541 aa7.42□□□□□ -1.22
VAMP3-201ENST00000054666 TIGD3Q6B0B8 471 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms