RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 FGD2Q7Z6J4 655 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 FAM71CQ8NEG0 241 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 OR51A4Q8NGJ6 313 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 DUSP19Q8WTR2 217 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 ATOH1Q92858 354 aaPredicted RBP11.88□□□□□ -0.51
CTNS-201ENST00000046640 MARVELD3Q96A59 401 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 AMELYQ99218 206 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 KCNK15Q9H427 330 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 MRM2Q9UI43 246 aaKnown RBP11.88□□□□□ -0.51
CTNS-201ENST00000046640 FREM2Q5SZK8 3169 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 IFITM5A6NNB3 132 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 H3BMH7 237 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 CTRB1P17538 263 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 ABCD3P28288 659 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 MAP2K6P52564 334 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 SMAD4Q13485 552 aaKnown RBP11.88□□□□□ -0.51
CTNS-201ENST00000046640 GGTLC2Q14390 218 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 CLLU1Q5K131 121 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 COL13A1Q5TAT6 717 aaPredicted RBP11.88□□□□□ -0.51
CTNS-201ENST00000046640 FAM69BQ5VUD6 431 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 CTRB2Q6GPI1 263 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 FAM198BQ6UWH4 519 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 C17orf82Q86X59 251 aaPredicted RBP11.88□□□□□ -0.51
CTNS-201ENST00000046640 ZNF440Q8IYI8 595 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 LRRC75AQ8NAA5 344 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 RBPMSQ93062 196 aaKnown RBP11.88□□□□□ -0.51
CTNS-201ENST00000046640 PPP1R14AQ96A00 147 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 LINC00052Q96N35 136 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 GSX2Q9BZM3 304 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 KLHL9Q9P2J3 617 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 LAMP5Q9UJQ1 280 aa11.88□□□□□ -0.51
CTNS-201ENST00000046640 CPED1A4D0V7 1026 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 BLACEA4D250 179 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 FRG2CA6NGY1 282 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 H0YC42 278 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 TRIM77I1YAP6 450 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 SIGLEC5O15389 551 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 CD53P19397 219 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 SIGLEC14Q08ET2 396 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 TMPRSS9Q7Z410 1059 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 OR8S1Q8NH09 359 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 HGDQ93099 445 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 FRRS1LQ9P0K9 344 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 FXYD6-FXYD2A0A087WZ82 144 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 IGKV3D-11A0A0A0MRZ8 115 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 ZNF879B4DU55 563 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 SLC25A12O75746 678 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 ACSM4P0C7M7 580 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 COL19A1Q14993 1142 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 MFSD13AQ14CX5 517 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 ELAVL1Q15717 326 aaKnown RBP11.87□□□□□ -0.51
CTNS-201ENST00000046640 HACD4Q5VWC8 232 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 TMPRSS12Q86WS5 348 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 PLXDC1Q8IUK5 500 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 GPR119Q8TDV5 335 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 RNF166Q96A37 237 aaPredicted RBP11.87□□□□□ -0.51
CTNS-201ENST00000046640 S100A16Q96FQ6 103 aaKnown RBP11.87□□□□□ -0.51
CTNS-201ENST00000046640 ACTR6Q9GZN1 396 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 WWTR1Q9GZV5 400 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 FXYD6Q9H0Q3 95 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 COPS7AQ9UBW8 275 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 EPHA6Q9UF33 1036 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 OR5V1Q9UGF6 321 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 ZNF281Q9Y2X9 895 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 V9GY05 133 aa11.87□□□□□ -0.51
CTNS-201ENST00000046640 FER1L5A0AVI2 2057 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 DUX1O43812 170 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 OPN1LWP04000 364 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 RRASP10301 218 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 P2RX1P51575 399 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 BIKQ13323 160 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 DYRK1AQ13627 763 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 MEP1BQ16820 701 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 C2orf68Q2NKX9 166 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 OGFOD3Q6PK18 319 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 C3P1Q6ZMU1 363 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 SLC38A9Q8NBW4 561 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 OR5M1Q8NGP8 315 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 PELOQ9BRX2 385 aaKnown RBP11.86□□□□□ -0.51
CTNS-201ENST00000046640 SLC19A3Q9BZV2 496 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 EVA1AQ9H8M9 152 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 UCK1Q9HA47 277 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 TCF7L1Q9HCS4 588 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 KCNG2Q9UJ96 466 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 RABL2BQ9UNT1 228 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 TCRBV16S1A1N1A0A5B0 115 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 BCAT2O15382 392 aaPredicted RBP11.86□□□□□ -0.51
CTNS-201ENST00000046640 GUSBP08236 651 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 IL11P20809 199 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 DPP4P27487 766 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 GUCA2AQ02747 115 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 LRRN1Q6UXK5 716 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 OVCH1Q7RTY7 1134 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 FAM220AQ7Z4H9 259 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 KCTD20Q7Z5Y7 419 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 ZBTB44Q8NCP5 570 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 OR5AK2Q8NH90 309 aa11.86□□□□□ -0.51
CTNS-201ENST00000046640 DVL3Q92997 716 aaPredicted RBP11.86□□□□□ -0.51
CTNS-201ENST00000046640 DUSP15Q9H1R2 295 aaPredicted RBP11.86□□□□□ -0.51
CTNS-201ENST00000046640 TAS2R5Q9NYW4 299 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms