RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ZNF676Q8N7Q3 588 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 GALNT11Q8NCW6 608 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 NSMAFQ92636 917 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 PPP1R14AQ96A00 147 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 CXorf58Q96LI9 332 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 PBX4Q9BYU1 374 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 RTN4RQ9BZR6 473 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 SYT4Q9H2B2 425 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 MOKQ9UQ07 419 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 ATG2AQ2TAZ0 1938 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 TRBV5-7A0A0A0MS05 114 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 FAM221BA6H8Z2 402 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 EPOPA6NHQ4 379 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 SNRPGP15A8MWD9 76 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 H7C417 338 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 XRCC3O43542 346 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 RBBP9O75884 186 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 TNFP01375 233 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 PROS1P07225 676 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 MAP2K6P52564 334 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 HHEXQ03014 270 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 SKP2Q13309 424 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 HYAL4Q2M3T9 481 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 C9orf50Q5SZB4 431 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 LINC00052Q96N35 136 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 GRHPRQ9UBQ7 328 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 MTFP1Q9UDX5 166 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 ETV7Q9Y603 341 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 ARPC5O15511 151 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 LDOC1O95751 146 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-233ENST00000642021 MAPK3P27361 379 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-233ENST00000642021 KIR3DL2P43630 455 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 YPEL5P62699 121 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 HLXQ14774 488 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-233ENST00000642021 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.53□□□□□ -0.4
PHGDH-233ENST00000642021 DCAF12L2Q5VW00 463 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 C1QL3Q5VWW1 255 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 FAM122CQ6P4D5 195 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 ALKAL2Q6UX46 152 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 C19orf47Q8N9M1 422 aaKnown RBP12.53□□□□□ -0.4
PHGDH-233ENST00000642021 LIPHQ8WWY8 451 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 TAAR8Q969N4 342 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 DMRTA2Q96SC8 542 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 GINS4Q9BRT9 223 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 MRI1Q9BV20 369 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 CHST6Q9GZX3 395 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 GPN1Q9HCN4 374 aaPredicted RBP12.53□□□□□ -0.4
PHGDH-233ENST00000642021 OPN4Q9UHM6 478 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 LAMA1P25391 3075 aa12.53□□□□□ -0.4
PHGDH-233ENST00000642021 TEX46H3BTG2 121 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 CTAG2O75638 210 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 ITGA5P08648 1049 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 APEHP13798 732 aaKnown RBP12.52□□□□□ -0.4
PHGDH-233ENST00000642021 AKT2P31751 481 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 OR7E24Q6IFN5 339 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 DVL3Q92997 716 aaPredicted RBP12.52□□□□□ -0.4
PHGDH-233ENST00000642021 RELTQ969Z4 430 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 FBRSQ9HAH7 460 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 STEAP1Q9UHE8 339 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 KIF25Q9UIL4 384 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 KCNG2Q9UJ96 466 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 SLCO1B1Q9Y6L6 691 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 COL4A2P08572 1712 aa12.52□□□□□ -0.4
PHGDH-233ENST00000642021 hCG_1807616A0A1W2PRN6 198 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 TMEM127O75204 238 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 TXNDC12O95881 172 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 RLN1P04808 185 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 NMBP08949 121 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 SEC61A1P61619 476 aaKnown RBP12.52□□□□□ -0.41
PHGDH-233ENST00000642021 ASPHD2Q6ICH7 369 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 RGS7BPQ6MZT1 257 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-233ENST00000642021 PM20D2Q8IYS1 436 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 MUC20Q8N307 709 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-233ENST00000642021 ZNF784Q8NCA9 323 aaPredicted RBP12.52□□□□□ -0.41
PHGDH-233ENST00000642021 MCHR2Q969V1 340 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 TMPRSS13Q9BYE2 586 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 DZANK1Q9NVP4 752 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 SDHAF2Q9NX18 166 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 KIR2DS5A0A0G2JLQ3 304 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 A0A0G2JNG1 304 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 GGT3PA6NGU5 568 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 KIR2DS3K7RE56 304 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 CLDN4O14493 209 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 HIST1H2ABP04908 130 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 PNMTP11086 282 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 HPGDP15428 266 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 MELKQ14680 651 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 KIR2DS5Q14953 304 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 TUSC1Q2TAM9 212 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 WDR38Q5JTN6 314 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 NKAIN2Q5VXU1 208 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 ANKRD16Q6P6B7 361 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 POMZP3Q6PJE2 187 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 SLC35D2Q76EJ3 337 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 HIST3H2AQ7L7L0 130 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 PRSS42Q7Z5A4 293 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 C7orf61Q8IZ16 206 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 OR51S1Q8NGJ8 323 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 COQ8AQ8NI60 647 aa12.52□□□□□ -0.41
PHGDH-233ENST00000642021 GPR148Q8TDV2 347 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms