RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 ADAM19Q9H013 955 aa8.77□□□□□ -1.01
PHGDH-222ENST00000641587 GABARAPL1Q9H0R8 117 aa8.77□□□□□ -1.01
PHGDH-222ENST00000641587 SMURF2Q9HAU4 748 aa8.77□□□□□ -1.01
PHGDH-222ENST00000641587 C12orf10Q9HB07 376 aa8.77□□□□□ -1.01
PHGDH-222ENST00000641587 KRT84Q9NSB2 600 aa8.77□□□□□ -1.01
PHGDH-222ENST00000641587 LPAR3Q9UBY5 353 aa8.77□□□□□ -1.01
PHGDH-222ENST00000641587 CHRNA9Q9UGM1 479 aa8.77□□□□□ -1.01
PHGDH-222ENST00000641587 PRDM4Q9UKN5 801 aa8.77□□□□□ -1.01
PHGDH-222ENST00000641587 SLC25A15Q9Y619 301 aa8.77□□□□□ -1.01
PHGDH-222ENST00000641587 SPIN1Q9Y657 262 aaPredicted RBP8.77□□□□□ -1.01
PHGDH-222ENST00000641587 A0A087WUJ7 227 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 TMEM72A0PK05 275 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 GJE1A6NN92 205 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 ANXA8P13928 327 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 USF1P22415 310 aaPredicted RBP8.76□□□□□ -1.01
PHGDH-222ENST00000641587 NTF4P34130 210 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 RAC3P60763 192 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 LSM11P83369 360 aaKnown RBP eCLIP8.76□□□□□ -1.01
PHGDH-222ENST00000641587 GGTLC2Q14390 218 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 FAM120AOSQ5T036 256 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 C3orf33Q6P1S2 294 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 PGBD2Q6P3X8 592 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 TMEM108Q6UXF1 575 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 IZUMO2Q6UXV1 221 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 GALNT5Q7Z7M9 940 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 ADGRG3Q86Y34 549 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 ZNF100Q8IYN0 542 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 RNF113BQ8IZP6 322 aaKnown RBP8.76□□□□□ -1.01
PHGDH-222ENST00000641587 PACRGLQ8N7B6 248 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 GNPDA2Q8TDQ7 276 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 DDIT4LQ96D03 193 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 MSI2Q96DH6 328 aaKnown RBP8.76□□□□□ -1.01
PHGDH-222ENST00000641587 SGTBQ96EQ0 304 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 C1orf159Q96HA4 380 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 SLC29A1Q99808 456 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 USB1Q9BQ65 265 aaKnown RBP8.76□□□□□ -1.01
PHGDH-222ENST00000641587 FUZQ9BT04 418 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 TMEM43Q9BTV4 400 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 C8orf4Q9NR00 106 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 MGAT4BQ9UQ53 548 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 TMEM5Q9Y2B1 443 aa8.76□□□□□ -1.01
PHGDH-222ENST00000641587 IGKV1D-42A0A075B6H8 117 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 CIB4A0PJX0 185 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 ARRDC5A6NEK1 342 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 ZNF724A8MTY0 619 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 A8MVM7 634 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 EFCAB9A8MZ26 197 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 H7C417 338 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 WIPF1O43516 503 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 AHSA1O95433 338 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 HPRP00739 348 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 GASTP01350 101 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 SAGP10523 405 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-222ENST00000641587 CDH2P19022 906 aaPredicted RBP8.75□□□□□ -1.01
PHGDH-222ENST00000641587 CBLP22681 906 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 PTAFRP25105 342 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 RPS5P46782 204 aaKnown RBP8.75□□□□□ -1.01
PHGDH-222ENST00000641587 DIO1P49895 249 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 DAPP51397 102 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 ALDH3A2P51648 485 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 RAD23AP54725 363 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 AQP4P55087 323 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 SLC25A53Q5H9E4 307 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 C9orf135Q5VTT2 229 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 ABLIM2Q6H8Q1 611 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 FAM166AQ6J272 317 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 FAHD1Q6P587 224 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 UBE2J2Q8N2K1 259 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 BPIFA2Q96DR5 249 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 SORCS2Q96PQ0 1159 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 SOX7Q9BT81 388 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 OSBPL10Q9BXB5 764 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 SLC19A3Q9BZV2 496 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 OR11A1Q9GZK7 315 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 RIBC2Q9H4K1 309 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 PAPOLBQ9NRJ5 636 aaKnown RBP8.75□□□□□ -1.01
PHGDH-222ENST00000641587 USE1Q9NZ43 259 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 KCNS2Q9ULS6 477 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 POFUT2Q9Y2G5 429 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 ATP23Q9Y6H3 246 aa8.75□□□□□ -1.01
PHGDH-222ENST00000641587 TRAV36DV7A0A075B6V5 113 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 IGHV4-61A0A0C4DH41 118 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 LOC100289279A0A1B0GTE1 492 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 ZC3H12DA2A288 527 aaKnown RBP8.74□□□□□ -1.01
PHGDH-222ENST00000641587 UNC119BA6NIH7 251 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 ZNF716A6NP11 495 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 VWC2LB2RUY7 222 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 ETV2O00321 342 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-222ENST00000641587 MITFO75030 526 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-222ENST00000641587 SOX14O95416 240 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 CH25HO95992 272 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 ALPLP05186 524 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 ITGA5P08648 1049 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 ZNF26P17031 533 aaPredicted RBP8.74□□□□□ -1.01
PHGDH-222ENST00000641587 GSTM3P21266 225 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 GTF2E2P29084 291 aaKnown RBP8.74□□□□□ -1.01
PHGDH-222ENST00000641587 OMPP47874 163 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 GZMKP49863 264 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 EFNA4P52798 201 aa8.74□□□□□ -1.01
PHGDH-222ENST00000641587 PRKCDQ05655 676 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms