RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 TMEM38BQ9NVV0 291 aa11.98□□□□□ -0.49
LINC00339-211ENST00000641009 MYEF2Q9P2K5 600 aaKnown RBP11.98□□□□□ -0.49
LINC00339-211ENST00000641009 M0R233 179 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 MRASO14807 208 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 DHHO43323 396 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 SYNGR3O43761 229 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 LILRA1O75019 489 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 BCL10O95999 233 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 SERPINA5P05154 406 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 F13BP05160 661 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 QDPRP09417 244 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 OR8G3PP0DMU2 310 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 SRD5A1P18405 259 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 TCN1P20061 433 aaPredicted RBP11.97□□□□□ -0.49
LINC00339-211ENST00000641009 GLRXP35754 106 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 ALDH3B1P43353 468 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 EVX1P49640 407 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 UGT2B15P54855 530 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 TAS2R41P59536 307 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 MYBPC1Q00872 1141 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 GALK2Q01415 458 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 RUNX1T1Q06455 604 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 KLF10Q13118 480 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 TRIP10Q15642 601 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 FXNQ16595 210 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 DEF8Q6ZN54 512 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 OR8J3Q8NGG0 315 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 TMEM255BQ8WV15 326 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 TMEM158Q8WZ71 300 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 SNX18Q96RF0 628 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 ZNF347Q96SE7 839 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 SH3GL1Q99961 368 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 C20orf141Q9NUB4 165 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 FGFR1OP2Q9NVK5 253 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 REV1Q9UBZ9 1251 aa11.97□□□□□ -0.49
LINC00339-211ENST00000641009 IGHG1P01857 330 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 MT-ND1P03886 318 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 TACSTD2P09758 323 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 CCL2P13500 99 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 APEX1P27695 318 aaKnown RBP11.96□□□□□ -0.49
LINC00339-211ENST00000641009 OR1E2P47887 323 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 SEC24CP53992 1094 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 CLRN1P58418 232 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 RPL18Q07020 188 aaKnown RBP11.96□□□□□ -0.49
LINC00339-211ENST00000641009 PIN1Q13526 163 aaPredicted RBP11.96□□□□□ -0.49
LINC00339-211ENST00000641009 RIN1Q13671 783 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 MAD2L1BPQ15013 274 aaPredicted RBP11.96□□□□□ -0.49
LINC00339-211ENST00000641009 CGB2Q6NT52 195 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 PAQR4Q8N4S7 273 aaPredicted RBP11.96□□□□□ -0.49
LINC00339-211ENST00000641009 SYT14Q8NB59 555 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 OR4K5Q8NGD3 323 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 ZNF583Q96ND8 569 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 SLC7A8Q9UHI5 535 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 RIMS3Q9UJD0 308 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 FBXL3Q9UKT7 428 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 BAG5Q9UL15 447 aa11.96□□□□□ -0.49
LINC00339-211ENST00000641009 A0A1W2PRG6 482 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 OR7A10O76100 309 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 TROVE2P10155 538 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC00339-211ENST00000641009 FUT1P19526 365 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 AQP2P41181 271 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 RBM34P42696 430 aaKnown RBP11.95□□□□□ -0.5
LINC00339-211ENST00000641009 CHN2P52757 468 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 ARFIP2P53365 341 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 RPS23P62266 143 aaKnown RBP11.95□□□□□ -0.5
LINC00339-211ENST00000641009 SRSF2Q01130 221 aaKnown RBP11.95□□□□□ -0.5
LINC00339-211ENST00000641009 HIST3H3Q16695 136 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 COQ5Q5HYK3 327 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 ELFN2Q5R3F8 820 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 SLC30A7Q8NEW0 376 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 NOXO1Q8NFA2 376 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 C10orf82Q8WW14 230 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 TMEM239Q8WW34 195 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 ASB10Q8WXI3 467 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 MCHR2Q969V1 340 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 OR51B6Q9H340 312 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 MS4A5Q9H3V2 200 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 RNF121Q9H920 327 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 SAR1AQ9NR31 198 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 DUSP13Q9UII6 198 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 ANK2Q01484 3957 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 LOC100653049A0A140TA62 436 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 BBIP1A8MTZ0 92 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 MCIDASD6RGH6 385 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 KRT34O76011 436 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 OR5F1O95221 314 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 FARS2O95363 451 aaKnown RBP11.95□□□□□ -0.5
LINC00339-211ENST00000641009 NPPAP01160 153 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 HPXP02790 462 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 FAM157BP0CG42 384 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 NAT2P11245 290 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 LSP1P33241 339 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 CCNIQ14094 377 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 ALKBH6Q3KRA9 238 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 LRRC23Q53EV4 343 aaPredicted RBP11.95□□□□□ -0.5
LINC00339-211ENST00000641009 ERICH5Q6P6B1 374 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 SLC16A14Q7RTX9 510 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 LRRC18Q8N456 261 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 MOSPD2Q8NHP6 518 aa11.95□□□□□ -0.5
LINC00339-211ENST00000641009 SGTBQ96EQ0 304 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms