RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421		Q96MT0	163 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	RERGL	Q9H628	205 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	EMC3	Q9P0I2	261 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	CHD6	Q8TD26	2715 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	INTS1	Q8N201	2190 aa	Known RBP	15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	PHF3	Q92576	2039 aa	Known RBP	15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	IGLV1-36	A0A0B4J1U3	117 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	SH3D21	A4FU49	640 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	MBD3L4	A6NDZ8	208 aa	Predicted RBP	15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	MBD3L3	A6NE82	208 aa	Predicted RBP	15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	MBD3L5	A6NJ08	208 aa	Predicted RBP	15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	SLC16A7	O60669	478 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	SS18L1	O75177	396 aa	Predicted RBP	15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	APOL3	O95236	402 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	ADRA2A	P08913	450 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	DBT	P11182	482 aa	Known RBP	15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	SLC15A1	P46059	708 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	CLRN1	P58418	232 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	CXCR4	P61073	352 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	FOXF2	Q12947	444 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	LRFN4	Q6PJG9	635 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	MEPCE	Q7L2J0	689 aa	Known RBP	15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	ZBTB46	Q86UZ6	589 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	TMEM54	Q969K7	222 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	INTS12	Q96CB8	462 aa	Known RBP	15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	GMPPA	Q96IJ6	420 aa	Predicted RBP	15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	FOXN4	Q96NZ1	517 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	TEAD3	Q99594	435 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	ALG12	Q9BV10	488 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	PLCXD1	Q9NUJ7	323 aa		15.71	■□□□□ 0.11
SPIN3-238	ENST00000640421	PRRG2	O14669	202 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	FAM20B	O75063	409 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	UPK3A	O75631	287 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	RPSA	P08865	295 aa	Known RBP	15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	CCDC159	P0C7I6	412 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	HTR1F	P30939	366 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	OTP	Q5XKR4	325 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	GTF2IRD2B	Q6EKJ0	949 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	LINGO2	Q7L985	606 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	HDDC2	Q7Z4H3	204 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	GTF2IRD2	Q86UP8	949 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	C20orf196	Q8IYI0	205 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	NAXE	Q8NCW5	288 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	ST6GALNAC3	Q8NDV1	305 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	MCHR2	Q969V1	340 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	NR1H4	Q96RI1	486 aa	Predicted RBP	15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	GP6	Q9HCN6	339 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	SH3BGRL2	Q9UJC5	107 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	B9D1	Q9UPM9	204 aa		15.7	■□□□□ 0.1
SPIN3-238	ENST00000640421	EIF4E1B	A6NMX2	242 aa	Known RBP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	IGHV3-9	P01782	118 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	GSTT1	P30711	240 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	PTGER4	P35408	488 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	CSNK1A1	P48729	337 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	MVK	Q03426	396 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	PIGF	Q07326	219 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	RBM48	Q5RL73	367 aa	Known RBP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	SHF	Q7M4L6	423 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	GID4	Q8IVV7	300 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	PROKR2	Q8NFJ6	384 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	GGH	Q92820	318 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	ZMYND19	Q96E35	227 aa	Predicted RBP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	ZNF837	Q96EG3	531 aa	Predicted RBP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	TP63	Q9H3D4	680 aa	Predicted RBP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	C12orf49	Q9H741	205 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	GLTP	Q9NZD2	209 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	H2AFY2	Q9P0M6	372 aa	Predicted RBP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	PSORS1C1	Q9UIG5	152 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	MYRF	Q9Y2G1	1151 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	FKBP7	Q9Y680	259 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	PTGES3L	E9PB15	166 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421		M0R3G1	203 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	AKAP8	O43823	692 aa	Known RBP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	SLC43A1	O75387	559 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	MRPL33	O75394	65 aa	Known RBP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	QDPR	P09417	244 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	MTNR1A	P48039	350 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	CDH15	P55291	814 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	RPS7	P62081	194 aa	Known RBP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	SIRPA	P78324	504 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	SLC35A2	P78381	396 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	THEM4	Q5T1C6	240 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	TSPO2	Q5TGU0	170 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	B3GNT6	Q6ZMB0	384 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	AHSA2	Q719I0	299 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	OR6K6	Q8NGW6	343 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	OR6N1	Q8NGY5	312 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	OR2T4	Q8NH00	348 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	NSMAF	Q92636	917 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	RFK	Q969G6	155 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	ALKBH3	Q96Q83	286 aa	Predicted RBP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	TM9SF2	Q99805	663 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	FKBP14	Q9NWM8	211 aa		15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	15.69	■□□□□ 0.1
SPIN3-238	ENST00000640421	TRIM64	A6NGJ6	449 aa		15.68	■□□□□ 0.1
SPIN3-238	ENST00000640421	CENPBD1	B2RD01	187 aa		15.68	■□□□□ 0.1
SPIN3-238	ENST00000640421	AHCYL1	O43865	530 aa		15.68	■□□□□ 0.1
SPIN3-238	ENST00000640421	GLCE	O94923	617 aa		15.68	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms