RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 LRRC3CA6NJW4 275 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 ETV2O00321 342 aaPredicted RBP7.16□□□□□ -1.26
SCARB2-220ENST00000640076 GNB5O14775 395 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 NME2P1O60361 137 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 SP1P08047 785 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 GP1BBP13224 206 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 TACR3P29371 465 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 TNFSF10P50591 281 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 DLX5P56178 289 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 PLPPR5Q32ZL2 321 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 FAHD1Q6P587 224 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 LINC00114Q6XXX2 140 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 ZNF730Q6ZMV8 503 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 BEND4Q6ZU67 534 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 GRINAQ7Z429 371 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 PACRGLQ8N7B6 248 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 OR2M7Q8NG81 312 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 OR1J4Q8NGS1 313 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 OR13C2Q8NGS9 318 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 MAGEE2Q8TD90 523 aaPredicted RBP7.16□□□□□ -1.26
SCARB2-220ENST00000640076 TMEM239Q8WW34 195 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 TMEM234Q8WY98 164 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 ZCCHC14Q8WYQ9 949 aaKnown RBP7.16□□□□□ -1.26
SCARB2-220ENST00000640076 ST8SIA1Q92185 356 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 ZNF597Q96LX8 424 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 JSRP1Q96MG2 331 aaPredicted RBP7.16□□□□□ -1.26
SCARB2-220ENST00000640076 GNRHR2Q96P88 292 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 FEVQ99581 238 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 MNTQ99583 582 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 RBM4BQ9BQ04 359 aaKnown RBP7.16□□□□□ -1.26
SCARB2-220ENST00000640076 FAM173AQ9BQD7 235 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 SRSF8Q9BRL6 282 aaKnown RBP7.16□□□□□ -1.26
SCARB2-220ENST00000640076 RBM4Q9BWF3 364 aaKnown RBP7.16□□□□□ -1.26
SCARB2-220ENST00000640076 PTGES2Q9H7Z7 377 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 MED17Q9NVC6 651 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 ING3Q9NXR8 418 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 USE1Q9NZ43 259 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 MBD2Q9UBB5 411 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 CSAG2Q9Y5P2 127 aa7.16□□□□□ -1.26
SCARB2-220ENST00000640076 NCKAP5O14513 1909 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 OR10H3O60404 316 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 CBR3O75828 277 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 IL18BPO95998 194 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 HPRP00739 348 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 STAG3L3P0CL85 134 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 PNMTP11086 282 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 AGAP20933 346 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 PTNP21246 168 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 CBLP22681 906 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 MC5RP33032 325 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 RBM34P42696 430 aaKnown RBP7.15□□□□□ -1.26
SCARB2-220ENST00000640076 PSMD7P51665 324 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 EFNB1P98172 346 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 AANATQ16613 207 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 TMEM200BQ69YZ2 307 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 KDM4DQ6B0I6 523 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 SLC25A25Q6KCM7 469 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 IZUMO2Q6UXV1 221 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 MBOAT2Q6ZWT7 520 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 LINC00471Q8N535 108 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 AQP11Q8NBQ7 271 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 SCMH1Q96GD3 660 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 NPAS1Q99742 590 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 VCXQ9H320 206 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 C12orf10Q9HB07 376 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 ZFP64Q9NPA5 681 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 KLHL1Q9NR64 748 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 SMPD3Q9NY59 655 aaPredicted RBP7.15□□□□□ -1.26
SCARB2-220ENST00000640076 BOKQ9UMX3 212 aaPredicted RBP7.15□□□□□ -1.26
SCARB2-220ENST00000640076 VDAC3Q9Y277 283 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 KLF13Q9Y2Y9 288 aaPredicted RBP7.15□□□□□ -1.26
SCARB2-220ENST00000640076 DNAJC13O75165 2243 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 PKD1L2Q7Z442 2459 aa7.15□□□□□ -1.26
SCARB2-220ENST00000640076 SPTA1P02549 2419 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 ZNF407Q9C0G0 2248 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 IGKV1D-42A0A075B6H8 117 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 SMIM30A4D0T7 59 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 E9PLN8 166 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 H0YJX3 145 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 DLGAP1O14490 977 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 DPP4P27487 766 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 CD97P48960 835 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 DAPP51397 102 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 POLR2HP52434 150 aaKnown RBP7.15□□□□□ -1.27
SCARB2-220ENST00000640076 UGT2B15P54855 530 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 AQP4P55087 323 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 DSCR4P56555 118 aaPredicted RBP7.15□□□□□ -1.27
SCARB2-220ENST00000640076 MERTKQ12866 999 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 FOXF1Q12946 379 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 ZNF273Q14593 569 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 TBR1Q16650 682 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 SLC25A53Q5H9E4 307 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 C1orf94Q6P1W5 598 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 SHISA2Q6UWI4 295 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 IGFL3Q6UXB1 125 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 NRMQ8IXM6 262 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 RNF113BQ8IZP6 322 aaKnown RBP7.15□□□□□ -1.27
SCARB2-220ENST00000640076 TM9SF4Q92544 642 aa7.15□□□□□ -1.27
SCARB2-220ENST00000640076 VKORC1Q9BQB6 163 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms