RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 MT-ND1P03886 318 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 LCATP04180 440 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 MPLP40238 635 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ASCL1P50553 236 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 LCN2P80188 198 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 CDC42EP1Q00587 391 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 KLF10Q13118 480 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 C19orf35Q6ZS72 473 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 OR1J1Q8NGS3 322 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SNIP1Q8TAD8 396 aaKnown RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ALG3Q92685 438 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 NTNG2Q96CW9 530 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 C12orf42Q96LP6 360 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ACCSQ96QU6 501 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ZSWIM1Q9BR11 485 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 SLC46A2Q9BY10 475 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 RPS10P5Q9NQ39 176 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 ALKBH4Q9NXW9 302 aa3.96□□□□□ -1.78
SCN3A-209ENST00000639244 MARCOQ9UEW3 520 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-209ENST00000639244 PCDH15Q96QU1 1955 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 VWA8A3KMH1 1905 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 DVL1O14640 695 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 RCC1P18754 421 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SNCAP37840 140 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SEC61GP60059 68 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 RAB32Q13637 225 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 OPCMLQ14982 345 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 EBPQ15125 230 aaKnown RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ADPRMQ3LIE5 342 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ILDR1Q86SU0 546 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 NIT1Q86X76 327 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 RNF152Q8N8N0 203 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ZC3HAV1LQ96H79 300 aaKnown RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 TRIB1Q96RU8 372 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 PAFAH2Q99487 392 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 PSMG3Q9BT73 122 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ACTR3CQ9C0K3 210 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 LYRM4Q9HD34 91 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 NLKQ9UBE8 527 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 MTCH2Q9Y6C9 303 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 LAMB2P55268 1798 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 TRAV8-7A0A075B6U6 113 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 A0A0D9SG52 128 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 H7C417 338 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 PCDH7O60245 1069 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ANXA9O76027 345 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 FTLP02792 175 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ELK3P41970 407 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 CLCN3P51790 818 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 TAS2R43P59537 309 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 IAH1Q2TAA2 248 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ASTE1Q2TB18 679 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF697Q5TEC3 545 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 BCORP1Q8N888 145 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 OR51S1Q8NGJ8 323 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 MACROD1Q9BQ69 325 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 OR11A1Q9GZK7 315 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 OR8D2Q9GZM6 311 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ZNF586Q9NXT0 402 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 RNF6Q9Y252 685 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 TET2Q6N021 2002 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 PHRF1Q9P1Y6 1649 aaKnown RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 IGHV2-70DA0A0C4DH43 119 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ANKRD20A5PA0PJZ0 165 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 MFSD11O43934 449 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 UMODP07911 640 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 RPA3P35244 121 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 DUSP3P51452 185 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 TMEM128Q5BJH2 165 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 COX20Q5RI15 118 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SMIM5Q71RC9 77 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 TSEN54Q7Z6J9 526 aaKnown RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 DCAF4Q8WV16 495 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 F2RL3Q96RI0 385 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 NPY6RQ99463 290 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SPSB2Q99619 263 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 FAAP24Q9BTP7 215 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 GPR88Q9GZN0 384 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SYT4Q9H2B2 425 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SEMA6CQ9H3T2 930 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 NOX3Q9HBY0 568 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SEMA4GQ9NTN9 838 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 TNCP24821 2201 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 ANKRD66B4E2M5 251 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 M0QXV9 152 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SYT7O43581 403 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 CEACAM5P06731 702 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 EPHA3P29320 983 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 AGTR1P30556 359 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 KLK7P49862 253 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 EFNB1P98172 346 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 SMAGPQ0VAQ4 97 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 MGAT2Q10469 447 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 PTP4A2Q12974 167 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 C1orf189Q5VU69 101 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 CDHR3Q6ZTQ4 885 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 MRPL41Q8IXM3 137 aaKnown RBP3.95□□□□□ -1.78
SCN3A-209ENST00000639244 OR5A2Q8NGI9 324 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 OR51F2Q8NH61 342 aa3.95□□□□□ -1.78
SCN3A-209ENST00000639244 GRAPLQ8TC17 118 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms