RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 MELKQ14680 651 aa15.84■□□□□ 0.13
CLN6-220ENST00000637450 MAD2L1BPQ15013 274 aaPredicted RBP15.84■□□□□ 0.13
CLN6-220ENST00000637450 REP15Q6BDI9 236 aa15.84■□□□□ 0.13
CLN6-220ENST00000637450 HIST3H2AQ7L7L0 130 aa15.84■□□□□ 0.13
CLN6-220ENST00000637450 CARM1Q86X55 608 aa15.84■□□□□ 0.13
CLN6-220ENST00000637450 RFLNBQ8N5W9 214 aa15.84■□□□□ 0.13
CLN6-220ENST00000637450 OR10A6Q8NH74 314 aa15.84■□□□□ 0.13
CLN6-220ENST00000637450 HIST1H2ACQ93077 130 aa15.84■□□□□ 0.13
CLN6-220ENST00000637450 THOC1Q96FV9 657 aaKnown RBP15.84■□□□□ 0.13
CLN6-220ENST00000637450 SH3GL3Q99963 347 aa15.84■□□□□ 0.13
CLN6-220ENST00000637450 RACGAP1Q9H0H5 632 aa15.84■□□□□ 0.13
CLN6-220ENST00000637450 INTS9Q9NV88 658 aaKnown RBP15.84■□□□□ 0.13
CLN6-220ENST00000637450 DUSP13Q9UII6 198 aa15.84■□□□□ 0.13
CLN6-220ENST00000637450 TRIM33Q9UPN9 1127 aa15.84■□□□□ 0.13
CLN6-220ENST00000637450 B4DSR2 109 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 KPNA4O00629 521 aaPredicted RBP15.83■□□□□ 0.12
CLN6-220ENST00000637450 FARS2O95363 451 aaKnown RBP15.83■□□□□ 0.12
CLN6-220ENST00000637450 BCL10O95999 233 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 QDPRP09417 244 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 ACHEP22303 614 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 GPR6P46095 362 aaPredicted RBP15.83■□□□□ 0.12
CLN6-220ENST00000637450 CRYBA2P53672 197 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 TMEM33P57088 247 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 MRPS11P82912 194 aaKnown RBP15.83■□□□□ 0.12
CLN6-220ENST00000637450 HIST3H3Q16695 136 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 INTS11Q5TA45 600 aaKnown RBP15.83■□□□□ 0.12
CLN6-220ENST00000637450 CCDC80Q76M96 950 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 SLC30A7Q8NEW0 376 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 SLC26A7Q8TE54 656 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 MAGEB18Q96M61 343 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 PRSS27Q9BQR3 290 aa15.83■□□□□ 0.12
CLN6-220ENST00000637450 MEPEQ9NQ76 525 aaPredicted RBP15.83■□□□□ 0.12
CLN6-220ENST00000637450 ZNF346Q9UL40 294 aaKnown RBP15.83■□□□□ 0.12
CLN6-220ENST00000637450 SLC22A23A1A5C7 686 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 UMPSP11172 480 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 NAT2P11245 290 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 PCMT1P22061 227 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 SRP14P37108 136 aaKnown RBP15.82■□□□□ 0.12
CLN6-220ENST00000637450 VMACQ2NL98 169 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 NRN1LQ496H8 165 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 RGS7BPQ6MZT1 257 aaPredicted RBP15.82■□□□□ 0.12
CLN6-220ENST00000637450 DPPA2Q7Z7J5 298 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 PAQR4Q8N4S7 273 aaPredicted RBP15.82■□□□□ 0.12
CLN6-220ENST00000637450 OR4K5Q8NGD3 323 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 CLDND2Q8NHS1 167 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 RASSF5Q8WWW0 418 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 YIPF5Q969M3 257 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 MCHR2Q969V1 340 aa15.82■□□□□ 0.12
CLN6-220ENST00000637450 A0A1W2PPW3 197 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 BLOC1S5-TXNDC5H3BN57 136 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 TCF21O43680 179 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 NCR1O76036 304 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 IGHG1P01857 330 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 RUNX1T1Q06455 604 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 TMEM53Q6P2H8 277 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 SLC16A14Q7RTX9 510 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 NANOGNBQ7Z5D8 188 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 SEPHS2Q99611 448 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 MRPL13Q9BYD1 178 aaKnown RBP15.81■□□□□ 0.12
CLN6-220ENST00000637450 C1orf198Q9H425 327 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 RNF121Q9H920 327 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 ZNF275Q9NSD4 429 aaPredicted RBP15.81■□□□□ 0.12
CLN6-220ENST00000637450 TAAR3PQ9P1P4 343 aa15.81■□□□□ 0.12
CLN6-220ENST00000637450 IGLV3-9A0A075B6K5 115 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 CENPBD1B2RD01 187 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 WNT9BO14905 357 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 CLPTM1O96005 669 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 MT-ND1P03886 318 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 FAM157BP0CG42 384 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 SAGP10523 405 aaPredicted RBP15.8■□□□□ 0.12
CLN6-220ENST00000637450 CCL2P13500 99 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 ZNF250P15622 560 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 FUT1P19526 365 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 UGT2B15P54855 530 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 CLRN1P58418 232 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 SELENOVP59797 346 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 RPL18Q07020 188 aaKnown RBP15.8■□□□□ 0.12
CLN6-220ENST00000637450 NKPD1Q17RQ9 610 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 ALKBH6Q3KRA9 238 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 SLC36A2Q495M3 483 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 METTL21CQ5VZV1 264 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 NANOGP8Q6NSW7 305 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 GLCCI1Q86VQ1 547 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 ZNF347Q96SE7 839 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 NARFLQ9H6Q4 476 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 NANOGQ9H9S0 305 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 CDH20Q9HBT6 801 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 NPHS2Q9NP85 383 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 GPR160Q9UJ42 338 aa15.8■□□□□ 0.12
CLN6-220ENST00000637450 A0A1W2PRG6 482 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 HMGB1P1B2RPK0 211 aaPredicted RBP15.79■□□□□ 0.12
CLN6-220ENST00000637450 FAM157AC9JC47 383 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 FBP2O00757 339 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 PPIHO43447 177 aaKnown RBP15.79■□□□□ 0.12
CLN6-220ENST00000637450 MGRN1O60291 552 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 EDF1O60869 148 aaKnown RBP15.79■□□□□ 0.12
CLN6-220ENST00000637450 RP2O75695 350 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 SNAP29O95721 258 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 PTHP01270 115 aa15.79■□□□□ 0.12
CLN6-220ENST00000637450 IGF2P01344 180 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms