RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 Q7L0L9 218 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 SSX6Q7RTT6 188 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 MOB3BQ86TA1 216 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 HPS6Q86YV9 775 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 WDFY1Q8IWB7 410 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 NRMQ8IXM6 262 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ZNF444Q8N0Y2 327 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 PGBD5Q8N414 524 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 DNAJC22Q8N4W6 341 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ZNF561Q8N587 486 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 RBMXL3Q8N7X1 1067 aaKnown RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 TMEM99Q8N816 258 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 THAP8Q8NA92 274 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ACVR1CQ8NER5 493 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 LFNGQ8NES3 379 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 OR4D10Q8NGI6 311 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 OR10V1Q8NGI7 309 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 OR6K2Q8NGY2 324 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 OR5R1Q8NH85 324 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 THAP6Q8TBB0 222 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 MAGEE2Q8TD90 523 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 BAALCQ8WXS3 180 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 YIPF5Q969M3 257 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 TLCD1Q96CP7 247 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 SCMH1Q96GD3 660 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 Q96MT0 163 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ERGIC2Q96RQ1 377 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 S1PR3Q99500 378 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 CDCA3Q99618 268 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 SDHCQ99643 169 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 MAP3K3Q99759 626 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 KXD1Q9BQD3 176 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 TMEM204Q9BSN7 226 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 TMED9Q9BVK6 235 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 CHRNA10Q9GZZ6 450 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 FAM49AQ9H0Q0 323 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 ING2Q9H160 280 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 DEFB129Q9H1M3 183 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 SPNS1Q9H2V7 528 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 OR51M1Q9H341 326 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 GAREM1Q9H706 876 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 NMRAL1Q9HBL8 299 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 EML4Q9HC35 981 aaKnown RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 BTNL2Q9UIR0 455 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ZNF221Q9UK13 617 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 OR52A1Q9UKL2 312 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 NUP50Q9UKX7 468 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 RAB26Q9ULW5 256 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 WDR83OSQ9Y284 106 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 B3GALT5Q9Y2C3 310 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 KLHDC2Q9Y2U9 406 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 ARL2BPQ9Y2Y0 163 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 USH1CQ9Y6N9 552 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 FLT4P35916 1363 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 IBTKQ9P2D0 1353 aaPredicted RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 NUP153P49790 1475 aaKnown RBP2.56□□□□□ -2
PSPC1-208ENST00000635562 FGD5Q6ZNL6 1462 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 NOTCH4Q99466 2003 aa2.56□□□□□ -2
PSPC1-208ENST00000635562 KIR2DL5BA0A0G2JN68 375 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 KIR2DL5BA0A0G2JPC4 375 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 PVALEFA0A1B0GWK0 134 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 A0A1W2PR80 420 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 hDV102S1A0JD36 115 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 LINC01553A4QN01 128 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 VPS37CA5D8V6 355 aaPredicted RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 YJEFN3A6XGL0 299 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 C17orf105B2RV13 164 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 C21orf140B9A014 251 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 DISC1C4P0D8 188 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 FTCDNL1E5RQL4 147 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 H7C0C1 242 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 DFFAO00273 331 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 SULT1C2O00338 296 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 ARHGEF10O15013 1369 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 SYNMO15061 1565 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 TAPBPO15533 448 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 FGF16O43320 207 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CHP2O43745 196 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 RNASEH1O60930 286 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 MPZL1O95297 269 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 ABCB11O95342 1321 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CLDN14O95500 239 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 HLA-AP01891 365 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 IFNA16P05015 189 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 C8orf88P0DMB2 117 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 IRF2P14316 349 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 CSNK2A2P19784 350 aaPredicted RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 PGCP20142 388 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 FUT3P21217 361 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 S100PP25815 95 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 GJB2P29033 226 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 GNRHRP30968 328 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 DUTP33316 252 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 ARR3P36575 388 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 SERPINB5P36952 375 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 RPL13AP40429 203 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 NBL1P41271 181 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 TNFSF9P41273 254 aa2.55□□□□□ -2
PSPC1-208ENST00000635562 RBM34P42696 430 aaKnown RBP2.55□□□□□ -2
PSPC1-208ENST00000635562 CDKN2AP42771 156 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms