RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SRP72O76094 671 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 OR4F21O95013 312 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 LCA5LO95447 670 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 IGLV1-44P01699 117 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 GSTA1P08263 222 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 COX6A1P12074 109 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 PVRP15151 417 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 SELEP16581 610 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 UGT2B7P16662 529 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF26P17031 533 aaPredicted RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 PAICSP22234 425 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 IDSP22304 550 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 PRKACGP22612 351 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 MMP11P24347 488 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 KDELR1P24390 212 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 PDHA2P29803 388 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 PRDX3P30048 256 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 SPAM1P38567 509 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 CD151P48509 253 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 RPS15P62841 145 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 PPIAP62937 165 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ACVR1Q04771 509 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 TFF3Q07654 80 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ART3Q13508 389 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 FAM189A2Q15884 450 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 TPD52L1Q16890 204 aaPredicted RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 PARP6Q2NL67 630 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ANKRD55Q3KP44 614 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 TEX44Q53QW1 395 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF311Q5JNZ3 666 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 NCR3LG1Q68D85 454 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 SULT1C3Q6IMI6 304 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 NIPAL3Q6P499 406 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 CBLN3Q6UW01 205 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 CES3Q6UWW8 571 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 FAM151BQ6UXP7 276 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 Q6ZPB1 254 aaPredicted RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 GLT6D1Q7Z4J2 308 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 NT5DC3Q86UY8 548 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 LCA5Q86VQ0 697 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 RAB43Q86YS6 212 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 PIANPQ8IYJ0 282 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF567Q8N184 647 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ARFGAP2Q8N6H7 521 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 BANPQ8N9N5 519 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 RELL2Q8NC24 303 aaPredicted RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ICA1LQ8NDH6 482 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 CHDHQ8NE62 594 aaPredicted RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 OR11G2Q8NGC1 345 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 OR5K2Q8NHB8 316 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 BRSK1Q8TDC3 778 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 NAT14Q8WUY8 206 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 PCNPQ8WW12 178 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC5A11Q8WWX8 675 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 CXorf40BQ96DE9 158 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 CNRIP1Q96F85 164 aaPredicted RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF414Q96IQ9 312 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ELMO2Q96JJ3 720 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 IP6K3Q96PC2 410 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 DUX3Q96PT4 197 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ERP44Q9BS26 406 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 DGCR6LQ9BY27 220 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 GBA3Q9H227 469 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 TSPY26PQ9H489 355 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 RMND5AQ9H871 391 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 PALMDQ9NP74 551 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 IL1RAPQ9NPH3 570 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 FARSBQ9NSD9 589 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 HRASLS2Q9NWW9 162 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 CTSFQ9UBX1 484 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 BAIAP2L1Q9UHR4 511 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ATP6V1HQ9UI12 483 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 LCMT1Q9UIC8 334 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF835Q9Y2P0 537 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ARL5AQ9Y689 179 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 BZW2Q9Y6E2 419 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 AKAP6Q13023 2319 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 EXPH5Q8NEV8 1989 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 RAI1Q7Z5J4 1906 aaPredicted RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 NPIPA5A0A0B4J1W7 369 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 IGHV3-38A0A0C4DH36 116 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 IGKV1-8A0A0C4DH67 115 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 A0A0J9YY10 115 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 A0A1B0GX78 115 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 A0A1W2PPV9 198 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 C2orf74A8MZ97 194 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 C9J4A7 227 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 E7EQ34 232 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 NPIPA5E9PKD4 350 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 C19orf84I3L1E1 186 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 APOC4-APOC2K7ER74 178 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 NR5A2O00482 541 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 PES1O00541 588 aaKnown RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 FBP2O00757 339 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 LIN7AO14910 233 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 TFECO14948 347 aaPredicted RBP2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 LRRTM2O43300 516 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 PSTPIP1O43586 416 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 UGT1A9O60656 530 aa2.02□□□□□ -2.09
SMARCB1-208ENST00000634926 TBX19O60806 448 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms