RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 PAK1IP1Q9NWT1 392 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 GHRLQ9UBU3 117 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 NUP50Q9UKX7 468 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 OAZ3Q9UMX2 235 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 ETV7Q9Y603 341 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 HS3ST3A1Q9Y663 406 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 RTL9Q8NET4 1388 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 USP47Q96K76 1375 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 TVP23AA6NH52 213 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 E5RGE8 158 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 J3QLI3 93 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CCL24O00175 119 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 PLPP3O14495 311 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 ACOT8O14734 319 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 HOXA3O43365 443 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 PSPNO60542 156 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 RNASEH1O60930 286 aaKnown RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 AP2A1O95782 977 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 IFNA16P05015 189 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 ADRB1P08588 477 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 ZGLP1P0C6A0 271 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 C8orf88P0DMB2 117 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 GTF2F2P13984 249 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 HOXB4P17483 251 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 NDUFB7P17568 137 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 AOC1P19801 751 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 FUT3P21217 361 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 MAOAP21397 527 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CA4P22748 312 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 S100PP25815 95 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 PPOXP50336 477 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 SGSHP51688 502 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CHN2P52757 468 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CRISP1P54107 249 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 MRPS11P82912 194 aaKnown RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 SF3A2Q15428 464 aaKnown RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CDSNQ15517 529 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 TMEM42Q69YG0 159 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 TMEM179Q6ZVK1 233 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 SSX6Q7RTT6 188 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 ANKRD37Q7Z713 158 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 DTX1Q86Y01 620 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 LGI3Q8N145 548 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 BEST3Q8N1M1 668 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 PAQR4Q8N4S7 273 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 OR2AE1Q8NHA4 323 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 GPR151Q8TDV0 419 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 RNF138Q8WVD3 245 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 NEU4Q8WWR8 484 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 BPIFA2Q96DR5 249 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 UHRF2Q96PU4 802 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 KCNA7Q96RP8 456 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CNN2Q99439 309 aaKnown RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 MRPS26Q9BYN8 205 aaKnown RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 FAM49AQ9H0Q0 323 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 PATZ1Q9HBE1 687 aaKnown RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 FGFR1OP2Q9NVK5 253 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 IMPAD1Q9NX62 359 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CISD1Q9NZ45 108 aaKnown RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 RCC2Q9P258 522 aaKnown RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 KLHL13Q9P2N7 655 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 B3GAT1Q9P2W7 334 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 B4GALT7Q9UBV7 327 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 ZNF391Q9UJN7 358 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 ZNF225Q9UK10 706 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 OR52A1Q9UKL2 312 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 SLC17A4Q9Y2C5 497 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 NSG2Q9Y328 171 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 USH1CQ9Y6N9 552 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 FAM95CA0A1B0GW59 222 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 SLC22A23A1A5C7 686 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 F5H5T6 163 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 HPGDSO60760 199 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 SHOX2O60902 331 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CTSVO60911 334 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CA1P00915 261 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 C2P06681 752 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 SCGB1A1P11684 91 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CD59P13987 128 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CSNK2A2P19784 350 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CEACAM6P40199 344 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 MEOX1P50221 254 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 OR2B8PP59922 312 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 RPS7P62081 194 aaKnown RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 SEMG2Q02383 582 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 OR1C1Q15619 314 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 WHAMMP3Q1A5X7 153 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 MS4A18Q3C1V0 323 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 TPRG1LQ5T0D9 272 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 GGNBP1Q5YKI7 109 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 PRR5LQ6MZQ0 368 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 RPL13AP3Q6NVV1 102 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 ASCL5Q7RTU5 278 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CLNKQ7Z7G1 428 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 C1QL4Q86Z23 238 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 CCDC71Q8IV32 467 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-213ENST00000630925 EMC1Q8N766 993 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 OR2AK2Q8NG84 335 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 OR4K1Q8NGD4 311 aa4.3□□□□□ -1.72
SDCBP-213ENST00000630925 OR52N4Q8NGI2 321 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms