RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ULBP2Q9BZM5 246 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 DENND2DQ9H6A0 471 aaPredicted RBP7.19□□□□□ -1.26
NEK3-209ENST00000618856 B3GAT2Q9NPZ5 323 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 STX18Q9P2W9 335 aaKnown RBP7.19□□□□□ -1.26
NEK3-209ENST00000618856 ZNF346Q9UL40 294 aaKnown RBP7.19□□□□□ -1.26
NEK3-209ENST00000618856 PLEKHA6Q9Y2H5 1048 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 LYVE1Q9Y5Y7 322 aa7.19□□□□□ -1.26
NEK3-209ENST00000618856 ANK3Q12955 4377 aaKnown RBP7.18□□□□□ -1.26
NEK3-209ENST00000618856 A0A096LPE4 126 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 A0A1W2PPZ6 126 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 MCIDASD6RGH6 385 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 E7EQL1 145 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 GYG2O15488 501 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 DHHO43323 396 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 DNAJC8O75937 253 aaPredicted RBP7.18□□□□□ -1.26
NEK3-209ENST00000618856 GADD45GO95257 159 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 CD8AP01732 235 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 CD14P08571 375 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 QDPRP09417 244 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 SAGP10523 405 aaPredicted RBP7.18□□□□□ -1.26
NEK3-209ENST00000618856 APEHP13798 732 aaKnown RBP7.18□□□□□ -1.26
NEK3-209ENST00000618856 ZNF14P17017 642 aaPredicted RBP7.18□□□□□ -1.26
NEK3-209ENST00000618856 FPR3P25089 353 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 RRM2P31350 389 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 ARR3P36575 388 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 GPR4P46093 362 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 GSSP48637 474 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 ZNF83P51522 516 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 SPOCK1Q08629 439 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 KEAP1Q14145 624 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 GK3PQ14409 553 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 CARD17Q5XLA6 110 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 PGBD2Q6P3X8 592 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 SLC25A47Q6Q0C1 308 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 B3GLCTQ6Y288 498 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 THSD4Q6ZMP0 1018 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 SLC22A24Q8N4F4 322 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 LINC00471Q8N535 108 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 ARIH2OSQ8N7S6 290 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 PAPD5Q8NDF8 572 aaKnown RBP7.18□□□□□ -1.26
NEK3-209ENST00000618856 OR6N1Q8NGY5 312 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 OR52J3Q8NH60 311 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 FNDC8Q8TC99 324 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 NEUROG1Q92886 237 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 NABP1Q96AH0 204 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 MCUR1Q96AQ8 359 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 FAM46AQ96IP4 442 aaKnown RBP7.18□□□□□ -1.26
NEK3-209ENST00000618856 SLC38A2Q96QD8 506 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 FOXB1Q99853 325 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 CADM1Q9BY67 442 aaKnown RBP7.18□□□□□ -1.26
NEK3-209ENST00000618856 GSX2Q9BZM3 304 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 UBTD1Q9HAC8 227 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 NOX3Q9HBY0 568 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 TMEM38BQ9NVV0 291 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 POMPQ9Y244 141 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 V9GYQ6 96 aa7.18□□□□□ -1.26
NEK3-209ENST00000618856 PLCE1Q9P212 2302 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 IGKV1D-43A0A0B4J1Z2 117 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 TCRBV3S1A0A5B6 114 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 A6NIZ1 184 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 M0R1B8 84 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 IMPA2O14732 288 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 ARPC3O15145 178 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 SERPINI2O75830 405 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 ATP5HO75947 161 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 NDUFB2O95178 105 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 SOD3P08294 240 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 MMP7P09237 267 aaPredicted RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 CECR9P0C854 216 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 RAP2AP10114 183 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 CDH2P19022 906 aaPredicted RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 ART1P52961 327 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 CTXN1P60606 82 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 UBE2NP61088 152 aaKnown RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 RAP1BP61224 184 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 RAP1AP62834 184 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 MRPS34P82930 218 aaKnown RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 SPIBQ01892 262 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 NAAAQ02083 359 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 TSPAN31Q12999 210 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 RFX4Q33E94 735 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 MESTQ5EB52 335 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 FGD3Q5JSP0 725 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 THEM4Q5T1C6 240 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 C11orf71Q6IPW1 123 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 ZNF544Q6NX49 715 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 KLHL24Q6TFL4 600 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 PRSS57Q6UWY2 283 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 ZNF813Q6ZN06 617 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 DPY19L2P2Q6ZN68 376 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 RRM2BQ7LG56 351 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 DPPA2Q7Z7J5 298 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 MDP1Q86V88 176 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 MYPOPQ86VE0 399 aaPredicted RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 ZNF584Q8IVC4 421 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 SKA3Q8IX90 412 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 SMAP2Q8WU79 429 aaPredicted RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 FBXW5Q969U6 566 aa7.17□□□□□ -1.26
NEK3-209ENST00000618856 RSRC1Q96IZ7 334 aaKnown RBP7.17□□□□□ -1.26
NEK3-209ENST00000618856 DHRS9Q9BPW9 319 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms