RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 SEMA4CQ9C0C4 833 aa13.52□□□□□ -0.25
SNPH-203ENST00000614659 TBC1D29Q9UFV1 150 aa13.52□□□□□ -0.25
SNPH-203ENST00000614659 A0A0A6YYD5 115 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 A0A1B0GTL3 188 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 PRAMEF25A6NGN4 478 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 SLC34A2O95436 690 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 ENPP1P22413 925 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 TPBGQ13641 420 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 RBM45Q8IUH3 476 aaKnown RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 NKAIN4Q8IVV8 208 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 SIAH3Q8IW03 269 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 SLC22A24Q8N4F4 322 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 MED30Q96HR3 178 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 PLEK2Q9NYT0 353 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 COL11A2P13942 1736 aaPredicted RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 ACOD1A6NK06 481 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 STMND1H3BQB6 276 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 OIP5O43482 229 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 CLEC2LP0C7M8 214 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 RAC2P15153 192 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 NME1P15531 152 aaKnown RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 ZNF750Q32MQ0 723 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 LPCAT3Q6P1A2 487 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 ADGRE4PQ86SQ3 457 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 TRAPPC6BQ86SZ2 158 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 ZNF695Q8IW36 515 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 SULF2Q8IWU5 870 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 CADM3Q8N126 398 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 OR9K2Q8NGE7 335 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 NUDT8Q8WV74 236 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 RSC1A1Q92681 617 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 RRNAD1Q96FB5 475 aaKnown RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 DOK1Q99704 481 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 SLC25A21Q9BQT8 299 aaPredicted RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 ULBP2Q9BZM5 246 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 METTL9Q9H1A3 318 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 SPOCK1Q08629 439 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 SPEM2Q0P670 501 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 TERB2Q8NHR7 220 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 PAQR8Q8TEZ7 354 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 CCDC74BQ96LY2 380 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 TMEM43Q9BTV4 400 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 SCPEP1Q9HB40 452 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 RAB22AQ9UL26 194 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 TIMM8BQ9Y5J9 83 aaPredicted RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 ZNF705FA8MVS1 300 aaPredicted RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 CRYABP02511 175 aaKnown RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 ZNF705DP0CH99 300 aaPredicted RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 ZNF705BP0CI00 300 aaPredicted RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 PPP2CBP62714 309 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 PPP2CAP67775 309 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 GRINAQ7Z429 371 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 ZNF707Q96C28 371 aaPredicted RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 PRMT8Q9NR22 394 aaPredicted RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 COLQQ9Y215 455 aaPredicted RBP13.51□□□□□ -0.25
SNPH-203ENST00000614659 SLC17A4Q9Y2C5 497 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 SCN9AQ15858 1988 aa13.51□□□□□ -0.25
SNPH-203ENST00000614659 PMS2P1A4D2B8 440 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 ANKRD33BA6NCL7 494 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 GABARAPH6UMI1 98 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 PMS2P2O95744 297 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 C1QBP02746 253 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 CTSLP07711 333 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 IL9P15248 144 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 CHRNB4P30926 498 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 BCL2A1Q16548 175 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 C12orf73Q69YU5 71 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 VN1R3Q9BXE9 311 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 C20orf85Q9H1P6 137 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 NOSIPQ9Y314 301 aaKnown RBP13.5□□□□□ -0.25
SNPH-203ENST00000614659 F5H5K5 113 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 SURF4O15260 269 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 TXNL1O43396 289 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 ETHE1O95571 254 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 CHRM4P08173 479 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 ACHEP22303 614 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 PFN4Q8NHR9 129 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 GCDHQ92947 438 aaPredicted RBP13.5□□□□□ -0.25
SNPH-203ENST00000614659 TMEM106AQ96A25 262 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 C3orf49Q96BT1 292 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 ARHGDIGQ99819 225 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 CDCP1Q9H5V8 836 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 METTL17Q9H7H0 456 aaPredicted RBP13.5□□□□□ -0.25
SNPH-203ENST00000614659 TMEFF2Q9UIK5 374 aaPredicted RBP13.5□□□□□ -0.25
SNPH-203ENST00000614659 FAM230AA0A1W2PPH8 454 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 SLC22A23A1A5C7 686 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 POM121BA6NF01 834 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 ARGFXA6NJG6 315 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 TNFSF14O43557 240 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 NUDT21O43809 227 aaKnown RBP13.5□□□□□ -0.25
SNPH-203ENST00000614659 MT-CO3P00414 261 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 HLA-AP01891 365 aaKnown RBP13.5□□□□□ -0.25
SNPH-203ENST00000614659 TPOP07202 933 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 BCDIN3DQ7Z5W3 292 aaKnown RBP13.5□□□□□ -0.25
SNPH-203ENST00000614659 BOLLQ8N9W6 283 aaKnown RBP13.5□□□□□ -0.25
SNPH-203ENST00000614659 TRABD2BA6NFA1 517 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 GALP22466 123 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 ERV3-1Q14264 604 aa13.5□□□□□ -0.25
SNPH-203ENST00000614659 SMAD2Q15796 467 aaKnown RBP13.5□□□□□ -0.25
SNPH-203ENST00000614659 SLC36A2Q495M3 483 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms