RNA–Protein interactions for RNA: ENST00000614256.4

CHTOP-207, Transcript of chromatin target of PRMT1, humanhuman

TSL 3 BASIC

Gene CHTOP, Length 1,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-207ENST00000614256 CALHM2Q9HA72 323 aa16.58■□□□□ 0.24
CHTOP-207ENST00000614256 SCN3BQ9NY72 215 aa16.58■□□□□ 0.24
CHTOP-207ENST00000614256 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.58■□□□□ 0.24
CHTOP-207ENST00000614256 RPL36Q9Y3U8 105 aaKnown RBP16.58■□□□□ 0.24
CHTOP-207ENST00000614256 IGLV1-36A0A0B4J1U3 117 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 SMIM18P0DKX4 95 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 CLRN1P58418 232 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 CSNK2BP67870 215 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 GFRALQ6UXV0 394 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 AAED1Q7RTV5 226 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 ZBTB46Q86UZ6 589 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 RPRMLQ8N4K4 120 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 C9orf106Q8NAJ2 232 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 RFKQ969G6 155 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 LGALS12Q96DT0 336 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 ALG12Q9BV10 488 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 FOXD3Q9UJU5 478 aaPredicted RBP16.57■□□□□ 0.24
CHTOP-207ENST00000614256 B9D1Q9UPM9 204 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 TPRKBQ9Y3C4 175 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 FAM215AQ9Y5M1 114 aa16.57■□□□□ 0.24
CHTOP-207ENST00000614256 MAGEA13PA6NCF6 341 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 FCGR2AP12318 317 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 ABOP16442 354 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 EEF1B2P24534 225 aaKnown RBP16.56■□□□□ 0.24
CHTOP-207ENST00000614256 GABARAPL2P60520 117 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 OTPQ5XKR4 325 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 GTF2IRD2BQ6EKJ0 949 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 LRFN4Q6PJG9 635 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 C3P1Q6ZMU1 363 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 SEM1Q6ZVN7 128 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 HDDC2Q7Z4H3 204 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 P4HA3Q7Z4N8 544 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 GTF2IRD2Q86UP8 949 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 PROKR2Q8NFJ6 384 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 OR6K6Q8NGW6 343 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 OR2T4Q8NH00 348 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 SMAP2Q8WU79 429 aaPredicted RBP16.56■□□□□ 0.24
CHTOP-207ENST00000614256 TMEM45BQ96B21 275 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 SIGLEC11Q96RL6 698 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 COPS4Q9BT78 406 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 BLOC1S6Q9UL45 172 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 RCE1Q9Y256 329 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 NOSIPQ9Y314 301 aaKnown RBP16.56■□□□□ 0.24
CHTOP-207ENST00000614256 SLC22A31A6NKX4 558 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 ZNF724A8MTY0 619 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 GPR171O14626 319 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 STSP08842 583 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 C21orf33P30042 268 aaPredicted RBP16.56■□□□□ 0.24
CHTOP-207ENST00000614256 ST3GAL4Q11206 333 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 NFATC3Q12968 1075 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 NSUN5P2Q63ZY6 315 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 B3GNT6Q6ZMB0 384 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 NUFIP2Q7Z417 695 aaKnown RBP16.56■□□□□ 0.24
CHTOP-207ENST00000614256 MCEMP1Q8IX19 187 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 GCNT2Q8N0V5 402 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 ZNF511Q8NB15 262 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 OR4F15Q8NGB8 312 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 TMEM54Q969K7 222 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 WBP1Q96G27 269 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 EMC3Q9P0I2 261 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 WARS2Q9UGM6 360 aaKnown RBP16.56■□□□□ 0.24
CHTOP-207ENST00000614256 FKBP7Q9Y680 259 aa16.56■□□□□ 0.24
CHTOP-207ENST00000614256 NCOA6Q14686 2063 aaPredicted RBP16.55■□□□□ 0.24
CHTOP-207ENST00000614256 SNTNA6NMZ2 147 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 UPK3AO75631 287 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 GLCEO94923 617 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 YES1P07947 543 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 MRPL3P09001 348 aaKnown RBP16.55■□□□□ 0.24
CHTOP-207ENST00000614256 AGTR1P30556 359 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 C20orf196Q8IYI0 205 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 TSPAN14Q8NG11 270 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 OR51G2Q8NGK0 314 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 OR52I1Q8NGK6 324 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 NSMAFQ92636 917 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 WNT2BQ93097 391 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 MCHR2Q969V1 340 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 ADGRL4Q9HBW9 690 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 MRPS18AQ9NVS2 196 aaKnown RBP16.55■□□□□ 0.24
CHTOP-207ENST00000614256 GLTPQ9NZD2 209 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 CNOT2Q9NZN8 540 aaKnown RBP16.55■□□□□ 0.24
CHTOP-207ENST00000614256 ZNF835Q9Y2P0 537 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 COA3Q9Y2R0 106 aaPredicted RBP16.55■□□□□ 0.24
CHTOP-207ENST00000614256 ZFYVE26Q68DK2 2539 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 NBASA2RRP1 2371 aa16.55■□□□□ 0.24
CHTOP-207ENST00000614256 EFCAB10A6NFE3 127 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 TVP23AA6NH52 213 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 M0R3G1 203 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 AKAP8O43823 692 aaKnown RBP16.54■□□□□ 0.24
CHTOP-207ENST00000614256 AHCYL1O43865 530 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 WDR1O75083 606 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 MT-ND2P03891 347 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 QDPRP09417 244 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 PIPP12273 146 aaPredicted RBP16.54■□□□□ 0.24
CHTOP-207ENST00000614256 CSNK1A1P48729 337 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 SLC35D3Q5M8T2 416 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 SLC25A47Q6Q0C1 308 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 LINGO2Q7L985 606 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 OR6N1Q8NGY5 312 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 RBP7Q96R05 134 aa16.54■□□□□ 0.24
CHTOP-207ENST00000614256 HAO2Q9NYQ3 351 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms