RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 SGCAQ16586 387 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 ZNF791Q3KP31 576 aaPredicted RBP8□□□□□ -1.13
PDE6A-204ENST00000613228 TMEM69Q5SWH9 247 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 NKAIN2Q5VXU1 208 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 SFRP4Q6FHJ7 346 aaPredicted RBP8□□□□□ -1.13
PDE6A-204ENST00000613228 PRICKLE2Q7Z3G6 844 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 MRPL41Q8IXM3 137 aaKnown RBP8□□□□□ -1.13
PDE6A-204ENST00000613228 IFI44Q8TCB0 444 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 A0A087WZY1 265 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 LOC102725191A0A1B0GVB3 256 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 CIB4A0PJX0 185 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 GGT3PA6NGU5 568 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 ERVH48-1M5A8F1 160 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 PRKRAO75569 313 aaKnown RBP8□□□□□ -1.13
PDE6A-204ENST00000613228 ATG12O94817 140 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 SCGB1D1O95968 90 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 GIPP09681 153 aaPredicted RBP8□□□□□ -1.13
PDE6A-204ENST00000613228 ACTBP60709 375 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 ACTG1P63261 375 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 CTAG1AP78358 180 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 CTF1Q16619 201 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 POGLUT1Q8NBL1 392 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 SLC39A7Q92504 469 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 LINC00052Q96N35 136 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 SULT4A1Q9BR01 284 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 EGLN3Q9H6Z9 239 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 MTCH2Q9Y6C9 303 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 TMED7-TICAM2A0A0A6YYA0 188 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 PRAMEF25A6NGN4 478 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 TMEM212A6NML5 194 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 UPK1AO00322 258 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 EIF1AYO14602 144 aaKnown RBP8□□□□□ -1.13
PDE6A-204ENST00000613228 IL33O95760 270 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 IFNA2P01563 188 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 FGF7P21781 194 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 GIFP27352 417 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 TACR3P29371 465 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 EIF1AXP47813 144 aaKnown RBP8□□□□□ -1.13
PDE6A-204ENST00000613228 PNLIPRP2P54317 469 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 NXPH1P58417 271 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 RUNX2Q13950 521 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 TBPL2Q6SJ96 375 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 CD300LDQ6UXZ3 194 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 USP51Q70EK9 711 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 CD163Q86VB7 1156 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 TEX19Q8NA77 164 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 CLEC1AQ8NC01 280 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 SLC16A11Q8NCK7 471 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 ST8SIA1Q92185 356 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 SLC41A2Q96JW4 573 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 FER1L6-AS2Q96M78 137 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 ZNF587Q96SQ5 575 aaPredicted RBP8□□□□□ -1.13
PDE6A-204ENST00000613228 NIPSNAP1Q9BPW8 284 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 PIGQQ9BRB3 760 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 KCND3Q9UK17 655 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 TMED7Q9Y3B3 224 aa8□□□□□ -1.13
PDE6A-204ENST00000613228 TRAV27A0A087WT01 109 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 SULT2B1O00204 365 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 LGALS8O00214 317 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 RBBP9O75884 186 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 ST6GAL1P15907 406 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 TUBG1P23258 451 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 CD34P28906 385 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 METAP1P53582 386 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 OR7A5Q15622 319 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 TUSC1Q2TAM9 212 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 ZMAT1Q5H9K5 638 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 FCRL6Q6DN72 434 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 ABLIM2Q6H8Q1 611 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 LYPD8Q6UX82 237 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 TMPRSS9Q7Z410 1059 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 NANOGP1Q8N7R0 232 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 SDR9C7Q8NEX9 313 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 OR13C2Q8NGS9 318 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 STK35Q8TDR2 534 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 CA5BP1Q8WTZ4 195 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 ZNF700Q9H0M5 742 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 ZNF281Q9Y2X9 895 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 WIF1Q9Y5W5 379 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 IQCMA0A1B0GVH7 501 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 TRDV1A0A1B0GX56 115 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 ARPC1BO15143 372 aaKnown RBP7.99□□□□□ -1.13
PDE6A-204ENST00000613228 PIAS2O75928 621 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 DRD5P21918 477 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 MMP11P24347 488 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 RFC3P40938 356 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 S100A10P60903 97 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 TRIM61Q5EBN2 209 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 TMED4Q7Z7H5 227 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 PRR22Q8IZ63 422 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 OR52I1Q8NGK6 324 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 THAP3Q8WTV1 239 aaPredicted RBP7.99□□□□□ -1.13
PDE6A-204ENST00000613228 TMEM255BQ8WV15 326 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 RNF141Q8WVD5 230 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 SENP5Q96HI0 755 aaPredicted RBP7.99□□□□□ -1.13
PDE6A-204ENST00000613228 WDR76Q9H967 626 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 USP36Q9P275 1121 aaKnown RBP7.99□□□□□ -1.13
PDE6A-204ENST00000613228 SERGEFQ9UGK8 458 aa7.99□□□□□ -1.13
PDE6A-204ENST00000613228 MCTS1Q9ULC4 181 aaKnown RBP7.99□□□□□ -1.13
PDE6A-204ENST00000613228 C13orf42A0A1B0GVH6 325 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms