RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 MRGPRDQ8TDS7 321 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 HSPB7Q9UBY9 170 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 TESQ9UGI8 421 aaKnown RBP4.59□□□□□ -1.68
VPS13D-213ENST00000613099 PPIAP62937 165 aaKnown RBP4.59□□□□□ -1.68
VPS13D-213ENST00000613099 SULF2Q8IWU5 870 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 VCX2Q9H322 139 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF286AQ9HBT8 521 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 ADAP2Q9NPF8 381 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 SGSHP51688 502 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 INPP5JQ15735 1006 aaPredicted RBP4.59□□□□□ -1.68
VPS13D-213ENST00000613099 AMZ1Q400G9 498 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 WDR73Q6P4I2 378 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 CYHR1Q6ZMK1 362 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM104Q8NE00 496 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 SH3RF2Q8TEC5 729 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 SLC46A1Q96NT5 459 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 P2RX7Q99572 595 aaKnown RBP4.59□□□□□ -1.68
VPS13D-213ENST00000613099 C20orf27Q9GZN8 174 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 SLC39A9Q9NUM3 307 aa4.59□□□□□ -1.68
VPS13D-213ENST00000613099 CXCL8P10145 99 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 MSX1P28360 303 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 MBOAT1Q6ZNC8 495 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 AMIGO3Q86WK7 504 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 LRIT1Q9P2V4 623 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ADAM29Q9UKF5 820 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TMEM265A0A087WTH1 108 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TCRBV5S2A0A599 114 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 NDUFB6O95139 128 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 EOMESO95936 686 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 FABP2P12104 132 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 INSRRP14616 1297 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 DGCR2P98153 550 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PRAMEF8Q5VWM4 474 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PRAMEF7Q5VXH5 474 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR52I1Q8NGK6 324 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 THAP3Q8WTV1 239 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ECHDC3Q96DC8 303 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SLC35A3Q9Y2D2 325 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR6C76A6NM76 312 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 RHOQP17081 205 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SERPINA2P20848 420 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 RAC1P63000 192 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF90Q03938 601 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 DLK2Q6UY11 383 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 NUDT13Q86X67 352 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 RGL4Q8IZJ4 473 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 CDS1Q92903 461 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 EFCAB11Q9BUY7 163 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TREX1Q9NSU2 369 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 MARCH2Q9P0N8 246 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 MSTNO14793 375 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 CSO75390 466 aaKnown RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 C6orf47O95873 294 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 BTNL8Q6UX41 500 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR1S2Q8NGQ3 325 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 R3HDM4Q96D70 268 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SPACA7Q96KW9 195 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 BANF2Q9H503 90 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OPN4Q9UHM6 478 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TCFL5Q9UL49 500 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 RNASET2O00584 256 aaKnown RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 RHOCP08134 193 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 NSG1P42857 185 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 CSNK1DP48730 415 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 COMPP49747 757 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SHC2P98077 582 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 KCTD18Q6PI47 426 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SDR9C7Q8NEX9 313 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR51S1Q8NGJ8 323 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR13C9Q8NGT0 318 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR52I2Q8NH67 350 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR5P2Q8WZ92 322 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TSGA13Q96PP4 275 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR8B4Q96RC9 309 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 CHD5Q8TDI0 1954 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 NSG1A0A0A6YYJ2 146 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 KDM4EB2RXH2 506 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 H3BRB1 525 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PAPLNO95428 1278 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PRRX1P54821 245 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 CASP9P55211 416 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 NHLH1Q02575 133 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 MZT1Q08AG7 82 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 BOP1Q14137 746 aaKnown RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 YOD1Q5VVQ6 348 aaPredicted RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SLC35E3Q7Z769 313 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 ZNF511Q8NB15 262 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR9Q2Q8NGE9 314 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 OR4D6Q8NGJ1 314 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PHOSPHO2Q8TCD6 241 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 SPPL3Q8TCT6 385 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PROKR1Q8TCW9 393 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 TSLPQ969D9 159 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 GDE1Q9NZC3 331 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 CARHSP1Q9Y2V2 147 aaKnown RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 DUXBA0A1W2PPF3 345 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 FDXRP22570 491 aa4.58□□□□□ -1.68
VPS13D-213ENST00000613099 NCBP2P52298 156 aaKnown RBP eCLIP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PAFAH1B3Q15102 231 aaKnown RBP4.58□□□□□ -1.68
VPS13D-213ENST00000613099 PRSS36Q5K4E3 855 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms