RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 FNDC11Q9BVV2 318 aa16.7■□□□□ 0.26
SGMS1-208ENST00000608287 OBP2BQ9NPH6 170 aa16.7■□□□□ 0.26
SGMS1-208ENST00000608287 B3GAT2Q9NPZ5 323 aa16.7■□□□□ 0.26
SGMS1-208ENST00000608287 C20orf141Q9NUB4 165 aa16.7■□□□□ 0.26
SGMS1-208ENST00000608287 RHCGQ9UBD6 479 aa16.7■□□□□ 0.26
SGMS1-208ENST00000608287 RPS6KA6Q9UK32 745 aa16.7■□□□□ 0.26
SGMS1-208ENST00000608287 J3KTA2 159 aa16.69■□□□□ 0.26
SGMS1-208ENST00000608287 PIP5K1CO60331 668 aa16.69■□□□□ 0.26
SGMS1-208ENST00000608287 OR7A10O76100 309 aa16.69■□□□□ 0.26
SGMS1-208ENST00000608287 TCN1P20061 433 aaPredicted RBP16.69■□□□□ 0.26
SGMS1-208ENST00000608287 MXRA7P84157 204 aa16.69■□□□□ 0.26
SGMS1-208ENST00000608287 SPOCK1Q08629 439 aa16.69■□□□□ 0.26
SGMS1-208ENST00000608287 GKAP1Q5VSY0 366 aaPredicted RBP16.69■□□□□ 0.26
SGMS1-208ENST00000608287 WDFY1Q8IWB7 410 aa16.69■□□□□ 0.26
SGMS1-208ENST00000608287 PGAM4Q8N0Y7 254 aa16.69■□□□□ 0.26
SGMS1-208ENST00000608287 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.69■□□□□ 0.26
SGMS1-208ENST00000608287 FAM156AQ8NDB6 213 aa16.69■□□□□ 0.26
SGMS1-208ENST00000608287 ZNF837Q96EG3 531 aaPredicted RBP16.69■□□□□ 0.26
SGMS1-208ENST00000608287 LRR1Q96L50 414 aa16.69■□□□□ 0.26
SGMS1-208ENST00000608287 MEGF8Q7Z7M0 2845 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 E7EQL1 145 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 IGF2P01344 180 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 NR4A2P43354 598 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 COMPP49747 757 aaPredicted RBP16.68■□□□□ 0.26
SGMS1-208ENST00000608287 ACTG1P63261 375 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 TUBA1BP68363 451 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 TUBA4AP68366 448 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 MELKQ14680 651 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 UGT2A3Q6UWM9 527 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 TUBA1AQ71U36 451 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 OFCC1Q8IZS5 231 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 RBM15BQ8NDT2 890 aaKnown RBP16.68■□□□□ 0.26
SGMS1-208ENST00000608287 MAGEE2Q8TD90 523 aaPredicted RBP16.68■□□□□ 0.26
SGMS1-208ENST00000608287 ULBP2Q9BZM5 246 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 NELFAQ9H3P2 528 aa16.68■□□□□ 0.26
SGMS1-208ENST00000608287 ARPC4-TTLL3A0A0A6YYG9 625 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 ZNF99A8MXY4 864 aaPredicted RBP16.67■□□□□ 0.26
SGMS1-208ENST00000608287 VWC2LB2RUY7 222 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 SEC14L2O76054 403 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 FAM107AO95990 144 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 EGR1P18146 543 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 FUT4P22083 530 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 CSNK1A1P48729 337 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 TRAM2Q15035 370 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 IQCCQ4KMZ1 466 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 SAMD4BQ5PRF9 694 aaKnown RBP16.67■□□□□ 0.26
SGMS1-208ENST00000608287 C16orf89Q6UX73 402 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 CYP4Z1Q86W10 505 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 OR6X1Q8NH79 312 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 CDRT15Q96T59 188 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 NDE1Q9NXR1 346 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 SAMD4AQ9UPU9 718 aaKnown RBP16.67■□□□□ 0.26
SGMS1-208ENST00000608287 POFUT2Q9Y2G5 429 aa16.67■□□□□ 0.26
SGMS1-208ENST00000608287 HEATR1Q9H583 2144 aaKnown RBP16.66■□□□□ 0.26
SGMS1-208ENST00000608287 LOC390937A0A1W2PQ73 354 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 FFAR1O14842 300 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 F13BP05160 661 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 IFI30P13284 250 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 HSD17B1P14061 328 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 HOXB1P14653 301 aaPredicted RBP16.66■□□□□ 0.26
SGMS1-208ENST00000608287 PAX7P23759 505 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 AQP2P41181 271 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 RPL18Q07020 188 aaKnown RBP16.66■□□□□ 0.26
SGMS1-208ENST00000608287 DEFB107AQ8IZN7 70 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 FITM2Q8N6M3 262 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 CCDC197Q8NCU1 140 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 HTRA1Q92743 480 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 ZNF566Q969W8 418 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 BPIFA2Q96DR5 249 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 MAN2C1Q9NTJ4 1040 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 DCAF13Q9NV06 445 aaKnown RBP16.66■□□□□ 0.26
SGMS1-208ENST00000608287 METRNQ9UJH8 293 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 ATP23Q9Y6H3 246 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 ENPP4Q9Y6X5 453 aa16.66■□□□□ 0.26
SGMS1-208ENST00000608287 IGHV1-18A0A0C4DH31 117 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 A0A1W2PRG6 482 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 BCL10O95999 233 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 ZNF23P17027 643 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 MSX2P35548 267 aaPredicted RBP16.65■□□□□ 0.26
SGMS1-208ENST00000608287 CAPZA2P47755 286 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 MNAT1P51948 309 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 KRT72Q14CN4 511 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 NRMQ8IXM6 262 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 LIPHQ8WWY8 451 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 SLC25A44Q96H78 314 aaPredicted RBP16.65■□□□□ 0.26
SGMS1-208ENST00000608287 C1orf159Q96HA4 380 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 SLC38A2Q96QD8 506 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 KCNS3Q9BQ31 491 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 GORASP2Q9H8Y8 452 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 INIPQ9NRY2 104 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 GLTPQ9NZD2 209 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 TMEFF2Q9UIK5 374 aaPredicted RBP16.65■□□□□ 0.26
SGMS1-208ENST00000608287 MAGEL2Q9UJ55 1249 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 FAM32AQ9Y421 112 aaKnown RBP16.65■□□□□ 0.26
SGMS1-208ENST00000608287 V9GYQ6 96 aa16.65■□□□□ 0.26
SGMS1-208ENST00000608287 SVEP1Q4LDE5 3571 aa16.64■□□□□ 0.26
SGMS1-208ENST00000608287 HTR3EA5X5Y0 456 aa16.64■□□□□ 0.25
SGMS1-208ENST00000608287 MCIDASD6RGH6 385 aa16.64■□□□□ 0.25
SGMS1-208ENST00000608287 PRSS23O95084 383 aa16.64■□□□□ 0.25
SGMS1-208ENST00000608287 SAGP10523 405 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms