RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 GYPBP06028 91 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 HOXD4P09016 255 aaPredicted RBP9.87□□□□□ -0.83
CTCFL-214ENST00000608108 CTLA4P16410 223 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 SPI1P17947 270 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 AGTR1P30556 359 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 NTF4P34130 210 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 CSNK1A1P48729 337 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 CHN2P52757 468 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 SLC25A1P53007 311 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 FMODQ06828 376 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 APOFQ13790 326 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 B3GNT6Q6ZMB0 384 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 C3P1Q6ZMU1 363 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.87□□□□□ -0.83
CTCFL-214ENST00000608108 DOLPP1Q86YN1 238 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 OR6V1Q8N148 313 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 PROKR2Q8NFJ6 384 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 OR51L1Q8NGJ5 315 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 OR6N1Q8NGY5 312 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 RFKQ969G6 155 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 KCTD12Q96CX2 325 aaKnown RBP9.87□□□□□ -0.83
CTCFL-214ENST00000608108 RBP7Q96R05 134 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 TM9SF2Q99805 663 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 NUAK2Q9H093 628 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 RERGLQ9H628 205 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 AMBNQ9NP70 447 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 SH3BGRL2Q9UJC5 107 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.87□□□□□ -0.83
CTCFL-214ENST00000608108 ESPL1Q14674 2120 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 MYO7BQ6PIF6 2116 aa9.87□□□□□ -0.83
CTCFL-214ENST00000608108 CACNA1CQ13936 2221 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 MBD3L4A6NDZ8 208 aaPredicted RBP9.86□□□□□ -0.83
CTCFL-214ENST00000608108 MBD3L3A6NE82 208 aaPredicted RBP9.86□□□□□ -0.83
CTCFL-214ENST00000608108 MBD3L5A6NJ08 208 aaPredicted RBP9.86□□□□□ -0.83
CTCFL-214ENST00000608108 SLC22A31A6NKX4 558 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 AHCYL1O43865 530 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 SLC16A7O60669 478 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 FAM20BO75063 409 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 SS18L1O75177 396 aaPredicted RBP9.86□□□□□ -0.83
CTCFL-214ENST00000608108 NR2C1P13056 603 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 SLC2A5P22732 501 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 HTR1FP30939 366 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 PER3P56645 1201 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 CXCR4P61073 352 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 ZNF91Q05481 1191 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 LGALS3BPQ08380 585 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 THEM4Q5T1C6 240 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 DNM1P34Q6PK57 102 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 SEM1Q6ZVN7 128 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 MEPCEQ7L2J0 689 aaKnown RBP9.86□□□□□ -0.83
CTCFL-214ENST00000608108 C20orf196Q8IYI0 205 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 RPRMLQ8N4K4 120 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 OR6K6Q8NGW6 343 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 OR2T4Q8NH00 348 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 MBD3L2Q8NHZ7 208 aaPredicted RBP9.86□□□□□ -0.83
CTCFL-214ENST00000608108 INTS12Q96CB8 462 aaKnown RBP9.86□□□□□ -0.83
CTCFL-214ENST00000608108 NR1H4Q96RI1 486 aaPredicted RBP9.86□□□□□ -0.83
CTCFL-214ENST00000608108 SRA1Q9HD15 236 aaKnown RBP9.86□□□□□ -0.83
CTCFL-214ENST00000608108 PARPBPQ9NWS1 579 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 ASB6Q9NWX5 421 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 GLTPQ9NZD2 209 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 FOXD3Q9UJU5 478 aaPredicted RBP9.86□□□□□ -0.83
CTCFL-214ENST00000608108 BLOC1S6Q9UL45 172 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 MYRFQ9Y2G1 1151 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 RPL36Q9Y3U8 105 aaKnown RBP9.86□□□□□ -0.83
CTCFL-214ENST00000608108 HIVEP3Q5T1R4 2406 aa9.86□□□□□ -0.83
CTCFL-214ENST00000608108 CCDC182A6NF36 153 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 FAM171A2A8MVW0 826 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 TNFAIP8O95379 198 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 CCDC159P0C7I6 412 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 DBTP11182 482 aaKnown RBP9.85□□□□□ -0.83
CTCFL-214ENST00000608108 CRHBPP24387 322 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 CRABP1P29762 137 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 PYCR1P32322 319 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 CSNK2BP67870 215 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 SIRPAP78324 504 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 HIST3H3Q16695 136 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 RBM48Q5RL73 367 aaKnown RBP9.85□□□□□ -0.83
CTCFL-214ENST00000608108 LCN1P1Q5VSP4 162 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 FAM214BQ7L5A3 538 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 NUFIP2Q7Z417 695 aaKnown RBP9.85□□□□□ -0.83
CTCFL-214ENST00000608108 ZBTB46Q86UZ6 589 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 CNEP1R1Q8N9A8 125 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 FNDC8Q8TC99 324 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 ZNRF4Q8WWF5 429 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 NSMAFQ92636 917 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 KISS1RQ969F8 398 aaPredicted RBP9.85□□□□□ -0.83
CTCFL-214ENST00000608108 TMEM54Q969K7 222 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 MCHR2Q969V1 340 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 APH1AQ96BI3 265 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 NMD3Q96D46 503 aaKnown RBP9.85□□□□□ -0.83
CTCFL-214ENST00000608108 ALKBH3Q96Q83 286 aaPredicted RBP9.85□□□□□ -0.83
CTCFL-214ENST00000608108 RHNO1Q9BSD3 238 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 RACGAP1Q9H0H5 632 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 C12orf49Q9H741 205 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 SCN3BQ9NY72 215 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 B9D1Q9UPM9 204 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 EMC9Q9Y3B6 208 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 FKBP7Q9Y680 259 aa9.85□□□□□ -0.83
CTCFL-214ENST00000608108 DIDO1Q9BTC0 2240 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms