RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 BOLLQ8N9W6 283 aaKnown RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 OR51G2Q8NGK0 314 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 TFGQ92734 400 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 FAF2Q96CS3 445 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 SCARF2Q96GP6 870 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 HRASLS5Q96KN8 279 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 AMDHD1Q96NU7 426 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 PSMG3-AS1Q96PY0 264 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 VAT1Q99536 393 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 TRMT61BQ9BVS5 477 aaKnown RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 HDAC8Q9BY41 377 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 C7orf69Q9H7B7 122 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 DNAJC4Q9NNZ3 241 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 MIOSQ9NXC5 875 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 PAK5Q9P286 719 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 MRTO4Q9UKD2 239 aaKnown RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 BAZ2BQ9UIF8 2168 aaKnown RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 CBY3A6NI87 242 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 AQP7P3A6NL99 342 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 F5H5T6 163 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 K7EN84 100 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 MBTPS2O43462 519 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 PLPP2O43688 288 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 XPNPEP2O43895 674 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 GGCTO75223 188 aaKnown RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 OR2F2O95006 317 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 IGF2P01344 180 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 BPGMP07738 259 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 CHRM4P08173 479 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 HIST1H2AGP0C0S8 130 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC35E2BP0CK96 405 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 HIST1H2ADP20671 130 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 PRPH2P23942 346 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 OR3A1P47881 315 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 RORCP51449 518 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 HAGHQ16775 308 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 RNF151Q2KHN1 245 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 CERCAMQ5T4B2 595 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 HIST2H2AA3Q6FI13 130 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF790Q6PG37 636 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 CD300LGQ6UXG3 332 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 CASP12Q6UXS9 341 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 Q6ZPB1 254 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 RNF165Q6ZSG1 346 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 AHSA2Q719I0 299 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 ABHD13Q7L211 337 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 MEPCEQ7L2J0 689 aaKnown RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 NAXDQ8IW45 347 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 PDZD9Q8IXQ8 264 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 CCDC54Q8NEL0 328 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 OR4K2Q8NGD2 314 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 XAGE5Q8WWM1 108 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 SCAMP4Q969E2 229 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 MSI2Q96DH6 328 aaKnown RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 MRPL53Q96EL3 112 aaKnown RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 CPNE2Q96FN4 548 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 CMTM7Q96FZ5 175 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 AURKBQ96GD4 344 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 FAM46AQ96IP4 442 aaKnown RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 HIST1H2AHQ96KK5 128 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 RNF2Q99496 336 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 HIST1H2AJQ99878 128 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 EGFL8Q99944 293 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 HAPLN2Q9GZV7 340 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 ATXN3LQ9H3M9 355 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 ZBTB20Q9HC78 741 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 Q9N2J8 555 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 ADARB2Q9NS39 739 aaKnown RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 ZNF701Q9NV72 531 aaPredicted RBP4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 RHCGQ9UBD6 479 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 OAZ3Q9UMX2 235 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 V9GYH0 126 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 SLX4Q8IY92 1834 aa4.54□□□□□ -1.68
SPTBN1-206ENST00000602898 TMEM72A0PK05 275 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 A8MWP6 167 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 DISC1C4P0D8 188 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 SLC1A7O00341 560 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 CYB561D2O14569 222 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 LATO43561 262 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 HPRP00739 348 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 AMD1P17707 334 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ENGP17813 658 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 APEX1P27695 318 aaKnown RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 C21orf33P30042 268 aaPredicted RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 TDGF1P3P51864 188 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 CTXN1P60606 82 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 CRYZQ08257 329 aaKnown RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 CNTN1Q12860 1018 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 PSG3Q16557 428 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 RBBP7Q16576 425 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 GUK1Q16774 197 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 AGKQ53H12 422 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ARL13AQ5H913 290 aaPredicted RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 FAM159AQ6UWV7 190 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 LINGO2Q7L985 606 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 MAVSQ7Z434 540 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 ANGPTL5Q86XS5 388 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 VRK3Q8IV63 474 aa4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 PUSL1Q8N0Z8 303 aaKnown RBP4.53□□□□□ -1.68
SPTBN1-206ENST00000602898 OR11H4Q8NGC9 324 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms