RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 XKRYO14609 159 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 MGRN1O60291 552 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 ENTPD5O75356 428 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 QDPRP09417 244 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 PPA1Q15181 289 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 NRN1LQ496H8 165 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 C10orf128Q5T292 105 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 ADCK1Q86TW2 530 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 HIPK1Q86Z02 1210 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 SYT14Q8NB59 555 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 PYDC1Q8WXC3 89 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 DNAJC9Q8WXX5 260 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 HDAC2Q92769 488 aaKnown RBP12.17□□□□□ -0.46
RNF40-212ENST00000602784 MCHR2Q969V1 340 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 GTPBP3Q969Y2 492 aaKnown RBP12.17□□□□□ -0.46
RNF40-212ENST00000602784 CENPNQ96H22 339 aaPredicted RBP12.17□□□□□ -0.46
RNF40-212ENST00000602784 SAMD8Q96LT4 415 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 Q96M85 177 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 ZNF570Q96NI8 536 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 RBP7Q96R05 134 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 ZNF556Q9HAH1 456 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 MOV10Q9HCE1 1003 aaKnown RBP12.17□□□□□ -0.46
RNF40-212ENST00000602784 IL20RAQ9UHF4 553 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 POFUT2Q9Y2G5 429 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 AMDHD2Q9Y303 409 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 SLC25A15Q9Y619 301 aa12.17□□□□□ -0.46
RNF40-212ENST00000602784 ITPR2Q14571 2701 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 ARPC4-TTLL3A0A0A6YYG9 625 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 DEFB108AA8MXU0 73 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 G3V2T6 193 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 H3BNX3 289 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 DHHO43323 396 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 CTAG2O75638 210 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 WNT11O96014 354 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 CDH2P19022 906 aaPredicted RBP12.16□□□□□ -0.46
RNF40-212ENST00000602784 HOXC12P31275 282 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 TBRG1Q3YBR2 411 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 BEX5Q5H9J7 111 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 FAHD1Q6P587 224 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 KLHL24Q6TFL4 600 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 SEZ6L2Q6UXD5 910 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 ZDHHC13Q8IUH4 622 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 SVOPLQ8N434 492 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 WDR31Q8NA23 367 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 OR52L1Q8NGH7 329 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 LRTOMTQ8WZ04 291 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 ZC3HAV1LQ96H79 300 aaKnown RBP12.16□□□□□ -0.46
RNF40-212ENST00000602784 NIPSNAP1Q9BPW8 284 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 IFT27Q9BW83 186 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 OSBPL10Q9BXB5 764 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 NELFAQ9H3P2 528 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 EGLN3Q9H6Z9 239 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 RASSF1Q9NS23 344 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 REV1Q9UBZ9 1251 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 IER3IP1Q9Y5U9 82 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 MAGED1Q9Y5V3 778 aaPredicted RBP12.16□□□□□ -0.46
RNF40-212ENST00000602784 ABCA4P78363 2273 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 ABCA12Q86UK0 2595 aa12.16□□□□□ -0.46
RNF40-212ENST00000602784 TEX13CA0A0J9YWL9 993 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 SLC22A23A1A5C7 686 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 PRSS37A4D1T9 235 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 BHLHE40O14503 412 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 ARHGEF9O43307 516 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 TP53P04637 393 aaPredicted RBP12.15□□□□□ -0.46
RNF40-212ENST00000602784 PRKACGP22612 351 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 ZNF84P51523 738 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 NR1H2P55055 460 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 TLE4Q04727 773 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 CD47Q08722 323 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 KRR1Q13601 381 aaKnown RBP12.15□□□□□ -0.46
RNF40-212ENST00000602784 HIKESHIQ53FT3 197 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 MESTQ5EB52 335 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 SLC25A47Q6Q0C1 308 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 KLHL17Q6TDP4 642 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 AMIGO2Q86SJ2 522 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 WFDC8Q8IUA0 241 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 HS3ST5Q8IZT8 346 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 LNX2Q8N448 690 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 FAM169BQ8N8A8 192 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 ERMAPQ96PL5 475 aaPredicted RBP12.15□□□□□ -0.46
RNF40-212ENST00000602784 SNX18Q96RF0 628 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 FOXB1Q99853 325 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 TMEM38BQ9NVV0 291 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 VSX1Q9NZR4 365 aaPredicted RBP12.15□□□□□ -0.46
RNF40-212ENST00000602784 BAIAP2Q9UQB8 552 aa12.15□□□□□ -0.46
RNF40-212ENST00000602784 PRR14LQ5THK1 2151 aa12.15□□□□□ -0.47
RNF40-212ENST00000602784 APCP25054 2843 aa12.15□□□□□ -0.47
RNF40-212ENST00000602784 SOCS2O14508 198 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 PPP1R3DO95685 299 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 HRGP04196 525 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 PRF1P14222 555 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 NOS3P29474 1203 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 UBE2NP61088 152 aaKnown RBP12.14□□□□□ -0.47
RNF40-212ENST00000602784 MRPS34P82930 218 aaKnown RBP12.14□□□□□ -0.47
RNF40-212ENST00000602784 MYBPC1Q00872 1141 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 C3orf36Q3SXR2 165 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 ZNF813Q6ZN06 617 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 DPPA2Q7Z7J5 298 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 PARP8Q8N3A8 854 aa12.14□□□□□ -0.47
RNF40-212ENST00000602784 ATG16L2Q8NAA4 619 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms