RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 SPEF1Q9Y4P9 236 aa18.28■□□□□ 0.52
PPFIA3-209ENST00000602783 SLC22A2O15244 555 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 LILRA1O75019 489 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 OR5F1O95221 314 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 IFNA14P01570 189 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 HIST1H2ABP04908 130 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 ZNF14P17017 642 aaPredicted RBP18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 OR1E2P47887 323 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 PTDSS1P48651 473 aaKnown RBP18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 CHN2P52757 468 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 RAB1AP62820 205 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 SRSF2Q01130 221 aaKnown RBP18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 MSMPQ1L6U9 139 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 CYBRD1Q53TN4 286 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 HIST3H2AQ7L7L0 130 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 NKAIN4Q8IVV8 208 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 OR2T12Q8NG77 320 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 TMEM255BQ8WV15 326 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 HIST1H2ACQ93077 130 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 ZNF75AQ96N20 296 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 MRPL37Q9BZE1 423 aaKnown RBP18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 POLR2J2Q9GZM3 115 aaKnown RBP18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 POLR2J3Q9H1A7 115 aaKnown RBP18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 TPK1Q9H3S4 243 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 ZNF224Q9NZL3 707 aa18.27■□□□□ 0.52
PPFIA3-209ENST00000602783 LYNX1G3V0Z9 82 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 MT-ND1P03886 318 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 TACSTD2P09758 323 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 LYNX1P0DP58 116 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 ZNF35P13682 527 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 IL2RGP31785 369 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 RBM34P42696 430 aaKnown RBP18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 GIPRP48546 466 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 PIN1Q13526 163 aaPredicted RBP18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 CR1LQ2VPA4 569 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 MICU2Q8IYU8 434 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 ZNF566Q969W8 418 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 MRPL24Q96A35 216 aaKnown RBP18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 SNX18Q96RF0 628 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 MED4Q9NPJ6 270 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 GLTPQ9NZD2 209 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 RIMS3Q9UJD0 308 aa18.26■□□□□ 0.51
PPFIA3-209ENST00000602783 BLOC1S5-TXNDC5H3BN57 136 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 SYNGR3O43761 229 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 RAB36O95755 333 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 PGA4P0DJD7 388 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 PGA3P0DJD8 388 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 APEX1P27695 318 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 KDELR2P33947 212 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 MDH1P40925 334 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 EVX1P49640 407 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 RIN1Q13671 783 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 GKAP1Q5VSY0 366 aaPredicted RBP18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 TMEM239Q8WW34 195 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 HPS1Q92902 700 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 SLC25A44Q96H78 314 aaPredicted RBP18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 TPD52L3Q96J77 140 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 DENND2DQ9H6A0 471 aaPredicted RBP18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 GMPR2Q9P2T1 348 aaKnown RBP18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 REV1Q9UBZ9 1251 aa18.25■□□□□ 0.51
PPFIA3-209ENST00000602783 ELOVL7A1L3X0 281 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 OR7A10O76100 309 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 UBL3O95164 117 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 TCN1P20061 433 aaPredicted RBP18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 GLRXP35754 106 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 GALK2Q01415 458 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 RPL18Q07020 188 aaKnown RBP18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 RAB39AQ14964 217 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 TRIP10Q15642 601 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 RP9Q8TA86 221 aaKnown RBP18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 SGTBQ96EQ0 304 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 SYT3Q9BQG1 590 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 C19orf24Q9BVV8 132 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 MS4A5Q9H3V2 200 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 C20orf141Q9NUB4 165 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 CMTM6Q9NX76 183 aa18.24■□□□□ 0.51
PPFIA3-209ENST00000602783 M0R233 179 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 BCL10O95999 233 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 IGHG1P01857 330 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 F13BP05160 661 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 PATE4P0C8F1 98 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 COX4I1P13073 169 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 PIWIL3Q7Z3Z3 882 aaKnown RBP18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 ARPINQ7Z6K5 226 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 LRP11Q86VZ4 500 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 SKA3Q8IX90 412 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 LINC01356Q8N9X3 169 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 NOXO1Q8NFA2 376 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 FGFBP3Q8TAT2 258 aa18.23■□□□□ 0.51
PPFIA3-209ENST00000602783 A0A1W2PRG6 482 aa18.22■□□□□ 0.51
PPFIA3-209ENST00000602783 MCIDASD6RGH6 385 aa18.22■□□□□ 0.51
PPFIA3-209ENST00000602783 PIP5K1CO60331 668 aa18.22■□□□□ 0.51
PPFIA3-209ENST00000602783 IGF2P01344 180 aa18.22■□□□□ 0.51
PPFIA3-209ENST00000602783 THRBP10828 461 aa18.22■□□□□ 0.51
PPFIA3-209ENST00000602783 FUT1P19526 365 aa18.22■□□□□ 0.51
PPFIA3-209ENST00000602783 ALDH3B1P43353 468 aa18.22■□□□□ 0.51
PPFIA3-209ENST00000602783 SEC24CP53992 1094 aa18.22■□□□□ 0.51
PPFIA3-209ENST00000602783 CLRN1P58418 232 aa18.22■□□□□ 0.51
PPFIA3-209ENST00000602783 LRFN4Q6PJG9 635 aa18.22■□□□□ 0.51
PPFIA3-209ENST00000602783 SLC22A24Q8N4F4 322 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms