RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 C1orf198Q9H425 327 aa13.55□□□□□ -0.24
IRF3-226ENST00000600453 TMEM38BQ9NVV0 291 aa13.55□□□□□ -0.24
IRF3-226ENST00000600453 RTTNQ86VV8 2226 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 LOC390937A0A1W2PQ73 354 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 SLC22A23A1A5C7 686 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 ZNF503-AS2A6NEH8 195 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 NPIPB13A6NJU9 1138 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 NPIPB4C9JG80 1138 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 hCG_2039718K7EN88 272 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 GMNNO75496 209 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 SERPINA5P05154 406 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 F13BP05160 661 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 TSPAN19P0C672 248 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 ZNF35P13682 527 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 ACADSP16219 412 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 ZNF14P17017 642 aaPredicted RBP13.54□□□□□ -0.24
IRF3-226ENST00000600453 USF1P22415 310 aaPredicted RBP13.54□□□□□ -0.24
IRF3-226ENST00000600453 PRDX6P30041 224 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 GLRXP35754 106 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 SLC7A2P52569 658 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 SNTB2Q13425 540 aaKnown RBP13.54□□□□□ -0.24
IRF3-226ENST00000600453 MELKQ14680 651 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 TRAM2Q15035 370 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 IFI44LQ53G44 452 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 GKAP1Q5VSY0 366 aaPredicted RBP13.54□□□□□ -0.24
IRF3-226ENST00000600453 CBLL1Q75N03 491 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 RRM2BQ7LG56 351 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 CYP4Z1Q86W10 505 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 SKA3Q8IX90 412 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 OR1J2Q8NGS2 313 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 PFN4Q8NHR9 129 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 GEMIN6Q8WXD5 167 aaKnown RBP13.54□□□□□ -0.24
IRF3-226ENST00000600453 MCHR2Q969V1 340 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 BPIFA2Q96DR5 249 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 DOK1Q99704 481 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 ELAC2Q9BQ52 826 aaKnown RBP13.54□□□□□ -0.24
IRF3-226ENST00000600453 PIMREGQ9BSJ6 248 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 MRPL13Q9BYD1 178 aaKnown RBP13.54□□□□□ -0.24
IRF3-226ENST00000600453 LRMDAQ9H2I8 198 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 TXNIPQ9H3M7 391 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 RNF121Q9H920 327 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 SEC61A2Q9H9S3 476 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 NOX3Q9HBY0 568 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 YAE1D1Q9NRH1 226 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 FAM53CQ9NYF3 392 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 A4GNTQ9UNA3 340 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 CR1P17927 2039 aa13.54□□□□□ -0.24
IRF3-226ENST00000600453 CRLF1O75462 422 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 ZNF682O95780 498 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 IFI30P13284 250 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 AQP2P41181 271 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 GUCA1AP43080 201 aaPredicted RBP13.53□□□□□ -0.24
IRF3-226ENST00000600453 PLP2Q04941 152 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 ALG10Q5BKT4 473 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 KRT80Q6KB66 452 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 CPLX4Q7Z7G2 160 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 ASB10Q8WXI3 467 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 ZNF75AQ96N20 296 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 SORCS2Q96PQ0 1159 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 RBP7Q96R05 134 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 SEPHS2Q99611 448 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 KCTD14Q9BQ13 255 aaPredicted RBP13.53□□□□□ -0.24
IRF3-226ENST00000600453 MS4A5Q9H3V2 200 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 SMURF2Q9HAU4 748 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 DYNLRB1Q9NP97 96 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 C20orf141Q9NUB4 165 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 SLC7A8Q9UHI5 535 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 RPS6KA6Q9UK32 745 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 HIF3AQ9Y2N7 669 aa13.53□□□□□ -0.24
IRF3-226ENST00000600453 SONP18583 2426 aaKnown RBP13.52□□□□□ -0.24
IRF3-226ENST00000600453 IQCMA0A1B0GVH7 501 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 A8MV72 311 aaPredicted RBP13.52□□□□□ -0.25
IRF3-226ENST00000600453 NME4O00746 187 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 TRMUO75648 421 aaKnown RBP13.52□□□□□ -0.25
IRF3-226ENST00000600453 SLC9A3P48764 834 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 NUDT2P50583 147 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 ZNF133P52736 654 aaPredicted RBP13.52□□□□□ -0.25
IRF3-226ENST00000600453 SELENOVP59797 346 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 LSM11P83369 360 aaKnown RBP eCLIP13.52□□□□□ -0.25
IRF3-226ENST00000600453 VLDLRP98155 873 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 PRKCDQ05655 676 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 KRTAP1-1Q07627 177 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 RAB39AQ14964 217 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 LAPTM4AQ15012 233 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 TMEM249Q2WGJ8 235 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 FAM205BPQ63HN1 556 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 CYB5R2Q6BCY4 276 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 C8orf82Q6P1X6 216 aaPredicted RBP13.52□□□□□ -0.25
IRF3-226ENST00000600453 SLC16A14Q7RTX9 510 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 MYPOPQ86VE0 399 aaPredicted RBP13.52□□□□□ -0.25
IRF3-226ENST00000600453 WDFY1Q8IWB7 410 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 OFCC1Q8IZS5 231 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 NOXO1Q8NFA2 376 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 OR4K5Q8NGD3 323 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 FAM162AQ96A26 154 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 MRPL24Q96A35 216 aaKnown RBP13.52□□□□□ -0.25
IRF3-226ENST00000600453 MS4A3Q96HJ5 214 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 NDEL1Q9GZM8 345 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 SIAEQ9HAT2 523 aa13.52□□□□□ -0.25
IRF3-226ENST00000600453 ZNF224Q9NZL3 707 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms