RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 SLC30A7Q8NEW0 376 aa7.35□□□□□ -1.23
SHKBP1-220ENST00000599716 OR4K5Q8NGD3 323 aa7.35□□□□□ -1.23
SHKBP1-220ENST00000599716 ZNF416Q9BWM5 594 aa7.35□□□□□ -1.23
SHKBP1-220ENST00000599716 ASPNQ9BXN1 380 aa7.35□□□□□ -1.23
SHKBP1-220ENST00000599716 ARMC7Q9H6L4 198 aa7.35□□□□□ -1.23
SHKBP1-220ENST00000599716 RNF121Q9H920 327 aa7.35□□□□□ -1.23
SHKBP1-220ENST00000599716 MOV10Q9HCE1 1003 aaKnown RBP7.35□□□□□ -1.23
SHKBP1-220ENST00000599716 BCL2L10Q9HD36 194 aa7.35□□□□□ -1.23
SHKBP1-220ENST00000599716 B3GAT2Q9NPZ5 323 aa7.35□□□□□ -1.23
SHKBP1-220ENST00000599716 IGHV3OR16-10A0A075B7F0 116 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 A0A0B4J2E0 115 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 IGHV1-69-2A0A0G2JMI3 117 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 A0A0G2JMP0 313 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 A0A0X1KG70 313 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 LOC102725191A0A1B0GVB3 256 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 A0A1B0GX12 115 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 ISPDA4D126 451 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 CPSF4LA6NMK7 179 aaKnown RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 SHOX2O60902 331 aaPredicted RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 PRSS23O95084 383 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 UBL3O95164 117 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 CH25HO95992 272 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 BCL10O95999 233 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 SERPINA5P05154 406 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 IDO1P14902 403 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 CCNOP22674 350 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 ZFP36P26651 326 aaKnown RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 PRKAR1BP31321 381 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 RAD52P43351 418 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 KLF3P57682 345 aaPredicted RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 NCALDP61601 193 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 RPS23P62266 143 aaKnown RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 CDK6Q00534 326 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 NPTX1Q15818 432 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 FBLN7Q53RD9 439 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 PAGE3Q5JUK9 113 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 GCNT6Q5T4J0 391 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 DHRS4L2Q6PKH6 230 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 SLC35D2Q76EJ3 337 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 ZNF627Q7L945 461 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 SYT14Q8NB59 555 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 ADPRHL1Q8NDY3 354 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 BHLHE22Q8NFJ8 381 aaPredicted RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 OR4M2Q8NGB6 313 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 OR4D11Q8NGI4 311 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 VANGL1Q8TAA9 524 aaPredicted RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 SYNPRQ8TBG9 265 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 GEMIN6Q8WXD5 167 aaKnown RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 CCL17Q92583 94 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 TMEM54Q969K7 222 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 SLC47A1Q96FL8 570 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 MAELQ96JY0 434 aaKnown RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 LRR1Q96L50 414 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 C1orf147Q96MC9 270 aaPredicted RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 ZNF347Q96SE7 839 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 GAL3ST1Q99999 423 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 TMEM109Q9BVC6 243 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 RBM4Q9BWF3 364 aaKnown RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 C7orf69Q9H7B7 122 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 RMND5AQ9H871 391 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 C12orf10Q9HB07 376 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 CDH20Q9HBT6 801 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 MMP26Q9NRE1 261 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 SDR39U1Q9NRG7 319 aaPredicted RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 TMEM38BQ9NVV0 291 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 MRPL39Q9NYK5 338 aaKnown RBP7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 TAS2R5Q9NYW4 299 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 GLTPQ9NZD2 209 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 ZIM2Q9NZV7 527 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 SLC7A8Q9UHI5 535 aa7.34□□□□□ -1.23
SHKBP1-220ENST00000599716 IGLV3-9A0A075B6K5 115 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 TMEM120BA0PK00 339 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 ZSCAN5BA6NJL1 495 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 CLDN25C9JDP6 229 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 UBDO15205 165 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 DHHO43323 396 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 RNF13O43567 381 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 SNNO75324 88 aaPredicted RBP7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 LYPD3O95274 346 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 IGHV1-46P01743 117 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 QDPRP09417 244 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 BMP2P12643 396 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 ETS2P15036 469 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 CDAP32320 146 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 LSP1P33241 339 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 WNT5AP41221 380 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 CRYBB2P43320 205 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 UCP2P55851 309 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 SEC61A1P61619 476 aaKnown RBP7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 SRSF4Q08170 494 aaKnown RBP7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 SCARB2Q14108 478 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 USP43Q70EL4 1123 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 NET1Q7Z628 596 aaPredicted RBP7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 PXKQ7Z7A4 578 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 FUNDC1Q8IVP5 155 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 ZNF101Q8IZC7 436 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 SCAIQ8N9R8 606 aa7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 CPEB3Q8NE35 698 aaKnown RBP7.33□□□□□ -1.24
SHKBP1-220ENST00000599716 GPR32P1Q8NGA4 272 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms